RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ZBTB10Q96DT7 871 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 KCNMB3Q9NPA1 279 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 ZMYND8Q9ULU4 1186 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 PCDHB6Q9Y5E3 794 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 ARVCFO00192 962 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 EML1O00423 815 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 PPFIA4O75335 1185 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 MFSD10Q14728 455 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 FAM47CQ5HY64 1035 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 TTC38Q5R3I4 469 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 LRCH2Q5VUJ6 765 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 MOXD1Q6UVY6 613 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 SLC43A3Q8NBI5 491 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 SEPT1Q8WYJ6 367 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 RNPEPQ9H4A4 650 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 TRMT13Q9NUP7 481 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 ELP1O95163 1332 aa19.41■□□□□ 0.7
SHROOM1-205ENST00000488072 A0A0U1RQG5 324 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 HAS3O00219 553 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 F2P00734 622 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 KIAA0753Q2KHM9 967 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 BRDTQ58F21 947 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 ABHD15Q6UXT9 468 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 TRMT1LQ7Z2T5 733 aaKnown RBP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 CCDC60Q8IWA6 550 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 GIMAP8Q8ND71 665 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 HDAC6Q9UBN7 1215 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 VAV3Q9UKW4 847 aa19.4■□□□□ 0.7
SHROOM1-205ENST00000488072 GAS7O60861 476 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 CAPN2P17655 700 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 ATP4AP20648 1035 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 ITGB8P26012 769 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 RESTQ13127 1097 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 UGCGQ16739 394 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 SWSAP1Q6NVH7 229 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 B3GNT9Q6UX72 402 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 C4orf32Q8N8J7 132 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 HTATIP2Q9BUP3 242 aa19.39■□□□□ 0.69
SHROOM1-205ENST00000488072 TRIM43BA6NCK2 446 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 H3BRB1 525 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 EVI5O60447 810 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 B4GALT4O60513 344 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 LGR5O75473 907 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 CABYRO75952 493 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 ATG7O95352 703 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 SUPT20HL2P0C7V6 817 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 FAAP100Q0VG06 881 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 GDF6Q6KF10 455 aaPredicted RBP19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 FAM126BQ8IXS8 530 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 TRIM43Q96BQ3 446 aaPredicted RBP19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 MTMR9Q96QG7 549 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 CTAGE1Q96RT6 745 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 TEKT3Q9BXF9 490 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 TUT1Q9H6E5 874 aaKnown RBP19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 PRDM5Q9NQX1 630 aaPredicted RBP19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 TBC1D22BQ9NU19 505 aa19.38■□□□□ 0.69
SHROOM1-205ENST00000488072 UMODL1Q5DID0 1318 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 STX6O43752 255 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 NEMFO60524 1076 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 KPNA6O60684 536 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 CYP2C9P11712 490 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 GCFC2P16383 781 aaKnown RBP19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 TXKP42681 527 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 CALCRLQ16602 461 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 TRAPPC12Q8WVT3 735 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 GLG1Q92896 1179 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 WNT8BQ93098 351 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 CHAMP1Q96JM3 812 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 RIT2Q99578 217 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 PDLIM7Q9NR12 457 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 SETD4Q9NVD3 440 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 GABBR1Q9UBS5 961 aa19.37■□□□□ 0.69
SHROOM1-205ENST00000488072 SCN10AQ9Y5Y9 1956 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 A0A087WWV3 80 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 IGKV6D-21A0A0A0MT36 114 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 TMEM150BA6NC51 233 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 H0YGN5 161 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 BACH1O14867 736 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 CD4P01730 458 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 SMIM10L2AP0DMW4 78 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 SMIM10L2BP0DMW5 78 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 SPIRE1Q08AE8 756 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 PLCB4Q15147 1175 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 IL17AQ16552 155 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 FOXD4L6Q3SYB3 417 aaPredicted RBP19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 C1orf53Q5VUE5 145 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 ZNF746Q6NUN9 644 aaPredicted RBP19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 FOXD4L3Q6VB84 417 aaPredicted RBP19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 DISC1Q9NRI5 854 aa19.36■□□□□ 0.69
SHROOM1-205ENST00000488072 ZNF862O60290 1169 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 MARCH6O60337 910 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 KRT76Q01546 638 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 NCAPH2Q6IBW4 605 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 ANKRD33Q7Z3H0 272 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 MIER3Q7Z3K6 550 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 BANK1Q8NDB2 785 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms