RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ZNF623O75123 536 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CDC45O75419 566 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CYP7B1O75881 506 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 ASMTLO95671 621 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 NTRK1P04629 796 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 SCG5P05408 212 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 PLS3P13797 630 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 PAMP19021 973 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 KCNJ6P48051 423 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 R3HDM1Q15032 1099 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 C21orf62-AS1Q17RA5 79 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 HS1BP3Q53T59 392 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 EGFLAMQ63HQ2 1017 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 ASXL2Q76L83 1435 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 ZSWIM2Q8NEG5 633 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CLUHP3Q96NS8 147 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CDC6Q99741 560 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 DHRS4Q9BTZ2 278 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 TMEM168Q9H0V1 697 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 L2HGDHQ9H9P8 463 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CLEC1BQ9P126 229 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 CD2APQ9Y5K6 639 aa4.25□□□□□ -1.73
R3HDM1-219ENST00000488035 NPHP3-ACAD11A0A0J9YXS1 232 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 PPP1R11O60927 126 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 RAPGEF3O95398 923 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 FUCA1P04066 466 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 LCP1P13796 627 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 HOXC12P31275 282 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 MAP4K2Q12851 820 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 LONRF2Q1L5Z9 754 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 INF2Q27J81 1249 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 SPDYAQ5MJ70 313 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 PKN3Q6P5Z2 889 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 CPNE8Q86YQ8 564 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 APPBP2Q92624 585 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 NCOA5Q9HCD5 579 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 TRAF6Q9Y4K3 522 aa4.24□□□□□ -1.73
R3HDM1-219ENST00000488035 MSCO60682 206 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 ZNF28P17035 718 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 PLEKHG4Q58EX7 1191 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 KCNT2Q6UVM3 1135 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 C16orf86Q6ZW13 317 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 USP53Q70EK8 1073 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 KIAA0907Q7Z7F0 614 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 STK32CQ86UX6 486 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 HOMER1Q86YM7 354 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SCUBE1Q8IWY4 988 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 PPIL6Q8IXY8 311 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SLC7A14Q8TBB6 771 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 KCTD13Q8WZ19 329 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SEC14L1Q92503 715 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SLC52A2Q9HAB3 445 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 SIT1Q9Y3P8 196 aa4.23□□□□□ -1.73
R3HDM1-219ENST00000488035 C7orf72A4D263 438 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 HSD3B2P26439 372 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 IL13P35225 146 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 NKX3-2P78367 333 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 ABHD18Q0P651 414 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 FOXE3Q13461 319 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 FGD2Q7Z6J4 655 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 FAM126BQ8IXS8 530 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 KBTBD2Q8IY47 623 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 MBD6Q96DN6 1003 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 CHFRQ96EP1 664 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 YTHDC1Q96MU7 727 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 WWC2-AS2Q96NR7 200 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 CLIC6Q96NY7 704 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 SYT3Q9BQG1 590 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 YIPF4Q9BSR8 244 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 SBNO2Q9Y2G9 1366 aa4.22□□□□□ -1.73
R3HDM1-219ENST00000488035 NPIPB8E9PQR5 432 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 CPP00450 1065 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 SDSP20132 328 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 SLC6A11P48066 632 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 PRKD1Q15139 912 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 DALRD3Q5D0E6 543 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 ZC3H12BQ5HYM0 836 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 ACBD5Q5T8D3 534 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 KLHL36Q8N4N3 616 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 AMER2Q8N7J2 671 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 RCBTB1Q8NDN9 531 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 PLEKHO2Q8TD55 490 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 SCLYQ96I15 445 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 CCDC140Q96MF4 163 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 WRNIP1Q96S55 665 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 FEZ1Q99689 392 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 PHF20Q9BVI0 1012 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 BARX1Q9HBU1 254 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 TRIM39Q9HCM9 518 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 PPARGC1AQ9UBK2 798 aaKnown RBP4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 FTSJ1Q9UET6 329 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 NDOR1Q9UHB4 597 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 NPFFR2Q9Y5X5 522 aa4.21□□□□□ -1.74
R3HDM1-219ENST00000488035 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-219ENST00000488035 FAM83GA6ND36 823 aa4.2□□□□□ -1.74
R3HDM1-219ENST00000488035 PLD2O14939 933 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms