RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TADA3O75528 432 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 SRGNP10124 158 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 CHRNA5P30532 468 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 CXCR5P32302 372 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 PLCB3Q01970 1234 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 EIF3CQ99613 913 aaKnown RBP12.91□□□□□ -0.34
TRA2B-214ENST00000487615 CHP1Q99653 195 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 A6NNZ2 444 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 SFI1A8K8P3 1242 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRA2B-214ENST00000487615 TUBB8Q3ZCM7 444 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 NT5DC1Q5TFE4 455 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 DEPTORQ8TB45 409 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 FAM170AA1A519 330 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 SARSP49591 514 aaKnown RBP12.9□□□□□ -0.34
TRA2B-214ENST00000487615 KCNH2Q12809 1159 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 KNOP1Q1ED39 458 aaKnown RBP12.9□□□□□ -0.34
TRA2B-214ENST00000487615 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 HINFPQ9BQA5 517 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 KCPQ6ZWJ8 1503 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 ENTPD3O75355 529 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 IRX3P78415 501 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-214ENST00000487615 PPP2R5EQ16537 467 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 ANKRD7Q92527 254 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 CCDC114Q96M63 670 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 SMIM23A6NLE4 172 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 ZMYND10O75800 440 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 LIG4P49917 911 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
TRA2B-214ENST00000487615 NR3C1P04150 777 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 ZNF18P17022 549 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.35
TRA2B-214ENST00000487615 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.35
TRA2B-214ENST00000487615 PRELPP51888 382 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 TRPC3Q13507 836 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 EDEM3Q9BZQ6 932 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 FEM1BQ9UK73 627 aa12.9□□□□□ -0.35
TRA2B-214ENST00000487615 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 GFPT2O94808 682 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 FTCDO95954 541 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 GUCY2FP51841 1108 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 C2orf54Q08AI8 447 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
TRA2B-214ENST00000487615 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 CSADQ9Y600 493 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
TRA2B-214ENST00000487615 GUCY2DQ02846 1103 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-214ENST00000487615 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 C1orf112Q9NSG2 853 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
TRA2B-214ENST00000487615 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
TRA2B-214ENST00000487615 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 SELENOSQ9BQE4 189 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 PCIF1Q9H4Z3 704 aa12.89□□□□□ -0.35
TRA2B-214ENST00000487615 LRRN2O75325 713 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 ALCAMQ13740 583 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 ABCB11O95342 1321 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 HDLBPQ00341 1268 aaKnown RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 CDKAL1Q5VV42 579 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 KRT12Q99456 494 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 RGPD5Q99666 1765 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 TBX3O15119 743 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 PDE6CP51160 858 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 NFIAQ12857 509 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 CCDC105Q8IYK2 499 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 GLG1Q92896 1179 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 POLD4Q9HCU8 107 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 SRGAP2O75044 1071 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-214ENST00000487615 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
TRA2B-214ENST00000487615 NDUFAB1O14561 156 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 EPHB4P54760 987 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 CASP8Q14790 479 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms