RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PRPHP41219 470 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 GCGRP47871 477 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 MRPS35P82673 323 aaKnown RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 COX10Q12887 443 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TRIM14Q14142 442 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SF3B3Q15393 1217 aaKnown RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 CCNG2Q16589 344 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TSGA10IPQ3SY00 556 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
SF1-217ENST00000486960 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 PLBD1Q6P4A8 553 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TMCO3Q6UWJ1 677 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 ABRAXAS1Q6UWZ7 409 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 RTL10Q7L3V2 364 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TBC1D1Q86TI0 1168 aaPredicted RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 CEP57L1Q8IYX8 460 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 RTKN2Q8IZC4 609 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 GJD3Q8N144 294 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SMCR8Q8TEV9 937 aaPredicted RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 DIS3LQ8TF46 1054 aaKnown RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 RAPGEF4Q8WZA2 1011 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SNX21Q969T3 373 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 CLIP3Q96DZ5 547 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 BORCS6Q96GS4 357 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SHDQ96IW2 340 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 RSRP1Q9BUV0 290 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 NT5C1AQ9BXI3 368 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TRIM8Q9BZR9 551 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 ARHGAP39Q9C0H5 1083 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 RMI1Q9H9A7 625 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 THEGQ9P2T0 379 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 PCSK1NQ9UHG2 260 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SNCAIPQ9Y6H5 919 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SCN9AQ15858 1988 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 ESPNB1AK53 854 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 OPLAHO14841 1288 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 GARTP22102 1010 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 PAX7P23759 505 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 DMTNQ08495 405 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 MOGSQ13724 837 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 SEPT6Q14141 434 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 GRM3Q14832 879 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 ATP13A4Q4VNC1 1196 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 ITPRIPL1Q6GPH6 555 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 RETSATQ6NUM9 610 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 UNC5DQ6UXZ4 953 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 STRA8Q7Z7C7 330 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 GSDMBQ8TAX9 411 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 HLA-CQ95604 372 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 HS3ST6Q96QI5 342 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 ISCA1Q9BUE6 129 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 NOC4LQ9BVI4 516 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 CCDC94Q9BW85 323 aaPredicted RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 NCOA5Q9HCD5 579 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 EPB41L4AQ9HCS5 686 aaPredicted RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 TRMT13Q9NUP7 481 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 TRMT1Q9NXH9 659 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 RRN3Q9NYV6 651 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 ZMYM5Q9UJ78 669 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 TRHDEQ9UKU6 1024 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 LHX6Q9UPM6 363 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 RRP7AQ9Y3A4 280 aaKnown RBP6.24□□□□□ -1.41
SF1-217ENST00000486960 RIC1Q4ADV7 1423 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 MGAMO43451 1857 aa6.24□□□□□ -1.41
SF1-217ENST00000486960 NBEAQ8NFP9 2946 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 KIF24Q5T7B8 1368 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 DNAJC25-GNG10A0A024R161 153 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 A0A087WZG4 1122 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 MINDY4BA8MYZ0 360 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 GPR39O43194 453 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 AKR1B10O60218 316 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 MICAL2O94851 1124 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 GJB1P08034 283 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 CCL5P13501 91 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 ATP6V1B1P15313 513 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 MX2P20592 715 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 ABCD1P33897 745 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 GRK6P43250 576 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 HSD17B7P56937 341 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 GABREP78334 506 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 MPP1Q00013 466 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 SP3Q02447 781 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 SREBF2Q12772 1141 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 STRN3Q13033 797 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 MRPL28Q13084 256 aaKnown RBP6.23□□□□□ -1.41
SF1-217ENST00000486960 EIF2B5Q13144 721 aaKnown RBP6.23□□□□□ -1.41
SF1-217ENST00000486960 MUM1Q2TAK8 710 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 PRR16Q569H4 304 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 METTL24Q5JXM2 366 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 HECTD3Q5T447 861 aa6.23□□□□□ -1.41
SF1-217ENST00000486960 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
SF1-217ENST00000486960 SYDE2Q5VT97 1194 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms