RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GIPC2Q8TF65 315 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 DDX11Q96FC9 970 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 SPACA7Q96KW9 195 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 RIOK1Q9BRS2 568 aaKnown RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 VCPKMTQ9H867 229 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 CXXC1Q9P0U4 656 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 SCHIP1Q9P0W5 487 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 DBNLQ9UJU6 430 aaKnown RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 ADAMTS5Q9UNA0 930 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 EYSQ5T1H1 3165 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 COL11A1P12107 1806 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-209ENST00000486618 SYNRGQ9UMZ2 1314 aa8.01□□□□□ -1.13
HDAC3-209ENST00000486618 CARNS1A5YM72 827 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ARVCFO00192 962 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 FGBP02675 491 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 CSF2RAP15509 400 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 FGFR3P22607 806 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 BDNFP23560 247 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 CST5P28325 142 aaPredicted RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 CDK7P50613 346 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ATP1A2P50993 1020 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 FOXK2Q01167 660 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ICA1Q05084 483 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ADGRE1Q14246 886 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 KIAA1755Q5JYT7 1200 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 SDE2Q6IQ49 451 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 FIGNL1Q6PIW4 674 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 DNAJC14Q6Y2X3 702 aaPredicted RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 C11orf96Q7Z7L8 435 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 NLRP8Q86W28 1048 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ZDHHC1Q8WTX9 485 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 HERVK_113Q902F9 699 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 SCARF2Q96GP6 870 aaPredicted RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 OXCT2Q9BYC2 517 aaPredicted RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 BRINP2Q9C0B6 783 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ZCCHC2Q9C0B9 1178 aaKnown RBP8□□□□□ -1.13
HDAC3-209ENST00000486618 IL23AQ9NPF7 189 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 ZDHHC3Q9NYG2 299 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 GABBR1Q9UBS5 961 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 HCN4Q9Y3Q4 1203 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 PARP14Q460N5 1801 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 PIEZO1Q92508 2521 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 NAV1Q8NEY1 1877 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
HDAC3-209ENST00000486618 VWA5AO00534 786 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 OIP5O43482 229 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 ASGR1P07306 291 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 ACRP10323 421 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 TRIM27P14373 513 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 IRS1P35568 1242 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 SLC9C2Q5TAH2 1124 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 MAMDC4Q6UXC1 1216 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 FRAT1Q92837 279 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 LENG1Q96BZ8 264 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 EAF2Q96CJ1 260 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 SEZ6LQ9BYH1 1024 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 LNPKQ9C0E8 428 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 NKX2-4Q9H2Z4 354 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 ABHD16BQ9H3Z7 469 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 KANSL2Q9H9L4 492 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 TLR7Q9NYK1 1049 aaKnown RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 ZHX1Q9UKY1 873 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
HDAC3-209ENST00000486618 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
HDAC3-209ENST00000486618 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 GOLGA6CA6NDK9 693 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 GOLGA6BA6NDN3 693 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 C2CD2LO14523 706 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 DHX16O60231 1041 aaKnown RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 BCAR3O75815 825 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 SNAI1O95863 264 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 APPP05067 770 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 GOLGA6DP0CG33 693 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 AKR1B1P15121 316 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 GJA9P57773 515 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 CTBSQ01459 385 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 ACVR2BQ13705 512 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 TBCELQ5QJ74 424 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 ERC1Q8IUD2 1116 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 FAM126BQ8IXS8 530 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 RPUSD2Q8IZ73 545 aaKnown RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 NEDD1Q8NHV4 660 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 SDR42E1Q8WUS8 393 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 SNRNP27Q8WVK2 155 aaKnown RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 UPF3AQ9H1J1 476 aaKnown RBP7.98□□□□□ -1.13
HDAC3-209ENST00000486618 ATP8A2Q9NTI2 1148 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 FBXO28Q9NVF7 368 aa7.98□□□□□ -1.13
HDAC3-209ENST00000486618 GOLGA6AQ9NYA3 693 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms