RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ZNF561-AS1K7EIQ3 104 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 KCNK3O14649 394 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 INHBBP09529 407 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 FAHP16930 419 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 ST5P78524 1137 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 CARFQ8N187 725 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 CISD2Q8N5K1 135 aaKnown RBP7.9□□□□□ -1.14
LTN1-206ENST00000486427 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 FEZF2Q8TBJ5 459 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 ZCCHC4Q9H5U6 513 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 PARD6AQ9NPB6 346 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 LUC7LQ9NQ29 371 aaKnown RBP7.9□□□□□ -1.14
LTN1-206ENST00000486427 NUB1Q9Y5A7 615 aa7.9□□□□□ -1.14
LTN1-206ENST00000486427 FAM90A27PA6NNH2 459 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
LTN1-206ENST00000486427 ASMTLO95671 621 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 FAM47CQ5HY64 1035 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 PRR31Q5SQ13 230 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 TTLL10Q6ZVT0 673 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 JAZF1Q86VZ6 243 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 ADAMTS20P59510 1910 aa7.89□□□□□ -1.15
LTN1-206ENST00000486427 RPL13P26373 211 aaKnown RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 SARSP49591 514 aaKnown RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 LACTBP83111 547 aaPredicted RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 CRY1Q16526 586 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 FNDC3BQ53EP0 1204 aaKnown RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 PHF19Q5T6S3 580 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 FSTL4Q6MZW2 842 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 SP8Q8IXZ3 490 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 XYLT2Q9H1B5 865 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 NTMQ9P121 344 aa7.88□□□□□ -1.15
LTN1-206ENST00000486427 MRPL42Q9Y6G3 142 aaKnown RBP7.88□□□□□ -1.15
LTN1-206ENST00000486427 OTOL1A6NHN0 477 aaPredicted RBP7.87□□□□□ -1.15
LTN1-206ENST00000486427 GSTA4O15217 222 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 DNAJC8O75937 253 aaPredicted RBP7.87□□□□□ -1.15
LTN1-206ENST00000486427 PTPN1P18031 435 aaKnown RBP7.87□□□□□ -1.15
LTN1-206ENST00000486427 HOXA5P20719 270 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 FIGNQ5HY92 759 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 BTBD8Q5XKL5 378 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 TTLL7Q6ZT98 887 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 OVCH1Q7RTY7 1134 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 NLGN4XQ8N0W4 816 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 TMEM209Q96SK2 561 aa7.87□□□□□ -1.15
LTN1-206ENST00000486427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.86□□□□□ -1.15
LTN1-206ENST00000486427 SDSP20132 328 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 KCNC1P48547 511 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 SEC23AQ15436 765 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 LCE4AQ5TA78 99 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 CD276Q5ZPR3 534 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 DTX3Q8N9I9 347 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 ATP23Q9Y6H3 246 aa7.86□□□□□ -1.15
LTN1-206ENST00000486427 SASH1O94885 1247 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 MLLT6P55198 1093 aaPredicted RBP7.85□□□□□ -1.15
LTN1-206ENST00000486427 PABPC4Q13310 644 aaKnown RBP eCLIP7.85□□□□□ -1.15
LTN1-206ENST00000486427 ZNF460Q14592 562 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 TKFCQ3LXA3 575 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 TM4SF20Q53R12 229 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 VASNQ6EMK4 673 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 HHIPL2Q6UWX4 724 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 ZNF761Q86XN6 746 aaPredicted RBP7.85□□□□□ -1.15
LTN1-206ENST00000486427 ZDHHC14Q8IZN3 488 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 ADAMTS17Q8TE56 1095 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 RIC8BQ9NVN3 520 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 FANCLQ9NW38 375 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 CROTQ9UKG9 612 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 CD2APQ9Y5K6 639 aa7.85□□□□□ -1.15
LTN1-206ENST00000486427 TNPO3Q9Y5L0 923 aaKnown RBP7.85□□□□□ -1.15
LTN1-206ENST00000486427 A0A0G2JLL6 359 aaPredicted RBP7.84□□□□□ -1.15
LTN1-206ENST00000486427 DDX3XO00571 662 aaKnown RBP eCLIP7.84□□□□□ -1.15
LTN1-206ENST00000486427 ZNF28P17035 718 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 PFKPQ01813 784 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 C21orf62-AS1Q17RA5 79 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 TMEM177Q53S58 311 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 NT5DC1Q5TFE4 455 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 CPZQ66K79 652 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 NOSTRINQ8IVI9 506 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
LTN1-206ENST00000486427 ZNF839A8K0R7 811 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 NOBOXO60393 691 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 CLASP2O75122 1294 aaKnown RBP7.83□□□□□ -1.16
LTN1-206ENST00000486427 RFPL3O75679 317 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 C4BPAP04003 597 aaKnown RBP7.83□□□□□ -1.16
LTN1-206ENST00000486427 IGFALSP35858 605 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 DBPQ10586 325 aaPredicted RBP7.83□□□□□ -1.16
LTN1-206ENST00000486427 SKIDA1Q1XH10 827 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 ZCCHC14Q8WYQ9 949 aaKnown RBP7.83□□□□□ -1.16
LTN1-206ENST00000486427 SLC39A2Q9NP94 309 aa7.83□□□□□ -1.16
LTN1-206ENST00000486427 SCDO00767 359 aa7.82□□□□□ -1.16
LTN1-206ENST00000486427 OPA1O60313 960 aa7.82□□□□□ -1.16
LTN1-206ENST00000486427 GLRX3O76003 335 aaKnown RBP7.82□□□□□ -1.16
LTN1-206ENST00000486427 ASLP04424 464 aa7.82□□□□□ -1.16
LTN1-206ENST00000486427 APPP05067 770 aa7.82□□□□□ -1.16
LTN1-206ENST00000486427 ENO2P09104 434 aaPredicted RBP7.82□□□□□ -1.16
LTN1-206ENST00000486427 COL6A1P12109 1028 aa7.82□□□□□ -1.16
LTN1-206ENST00000486427 IL13P35225 146 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms