RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 DEFB123Q8N688 67 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 PIBF1Q8WXW3 757 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 BRF1Q92994 677 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 TCEANC2Q96MN5 208 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 CTAGE1Q96RT6 745 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
VPS50-218ENST00000485994 EHMT1Q9H9B1 1298 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 SH3GLB2Q9NR46 395 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 TRMT13Q9NUP7 481 aaKnown RBP8.03□□□□□ -1.12
VPS50-218ENST00000485994 GTF2IRD1Q9UHL9 959 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 CYP46A1Q9Y6A2 500 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 H3BRB1 525 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 MEIS1O00470 390 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 CYP3A4P08684 503 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 IQCF3P0C7M6 154 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 SCG2P13521 617 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 CPA1P15085 419 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 ITGB5P18084 799 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 GNA11P29992 359 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 NAPAP54920 295 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 ADAM17P78536 824 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 PTK7Q13308 1070 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 TOB2Q14106 344 aaPredicted RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 MFSD10Q14728 455 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 PTGISQ16647 500 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 KIAA0753Q2KHM9 967 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 TYW1BQ6NUM6 668 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 CYFIP1Q7L576 1253 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 NIPA1Q7RTP0 329 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 C7orf31Q8N865 590 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 RETREG2Q8NC44 543 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 AFAP1L1Q8TED9 768 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 CCDC12Q8WUD4 166 aaPredicted RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 CRYGNQ8WXF5 182 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 SEPT1Q8WYJ6 367 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
VPS50-218ENST00000485994 RNPC3Q96LT9 517 aaKnown RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 GPR20Q99678 358 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 MXRA8Q9BRK3 442 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 PPP1R12CQ9BZL4 782 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 WNT8AQ9H1J5 351 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 MTIF3Q9H2K0 278 aaKnown RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
VPS50-218ENST00000485994 BCAS3Q9H6U6 928 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 HDAC6Q9UBN7 1215 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 NFASCO94856 1347 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 UMODL1Q5DID0 1318 aa8.02□□□□□ -1.13
VPS50-218ENST00000485994 COL6A3P12111 3177 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
VPS50-218ENST00000485994 ATP9AO75110 1047 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 CAND2O75155 1236 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 ATG7O95352 703 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 CXCL10P02778 98 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 GNAT1P11488 350 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 CYP2C9P11712 490 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 KCNA2P16389 499 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 SREBF1P36956 1147 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 ADCY7P51828 1080 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 CCL23P55773 120 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 GPNMBQ14956 572 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 TRIM71Q2Q1W2 868 aaKnown RBP8.01□□□□□ -1.13
VPS50-218ENST00000485994 CEP55Q53EZ4 464 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 FAM43BQ6ZT52 329 aaPredicted RBP8.01□□□□□ -1.13
VPS50-218ENST00000485994 HEATR3Q7Z4Q2 680 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 RPAINQ86UA6 219 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 RAB11FIP4Q86YS3 637 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 PHOSPHO2Q8TCD6 241 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 BICD2Q8TD16 824 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 RNPEPQ9H4A4 650 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 C6orf50Q9HD87 102 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 SCN5AQ14524 2016 aa8.01□□□□□ -1.13
VPS50-218ENST00000485994 DOCK5Q9H7D0 1870 aa8□□□□□ -1.13
VPS50-218ENST00000485994 GSTTP1A0A1W2PQM5 241 aa8□□□□□ -1.13
VPS50-218ENST00000485994 C17orf102A2RUQ5 167 aa8□□□□□ -1.13
VPS50-218ENST00000485994 NOP56O00567 594 aaKnown RBP8□□□□□ -1.13
VPS50-218ENST00000485994 LGR5O75473 907 aa8□□□□□ -1.13
VPS50-218ENST00000485994 LGALS2P05162 132 aa8□□□□□ -1.13
VPS50-218ENST00000485994 ACRP10323 421 aa8□□□□□ -1.13
VPS50-218ENST00000485994 ACTN1P12814 892 aa8□□□□□ -1.13
VPS50-218ENST00000485994 SELPP16109 830 aa8□□□□□ -1.13
VPS50-218ENST00000485994 CIITAP33076 1130 aa8□□□□□ -1.13
VPS50-218ENST00000485994 AKAP17AQ02040 695 aaKnown RBP8□□□□□ -1.13
VPS50-218ENST00000485994 MTMR1Q13613 665 aa8□□□□□ -1.13
VPS50-218ENST00000485994 UBE2SQ16763 222 aa8□□□□□ -1.13
VPS50-218ENST00000485994 FAM47CQ5HY64 1035 aa8□□□□□ -1.13
VPS50-218ENST00000485994 ZNF697Q5TEC3 545 aa8□□□□□ -1.13
VPS50-218ENST00000485994 SERINC5Q86VE9 423 aa8□□□□□ -1.13
VPS50-218ENST00000485994 DHX38Q92620 1227 aaKnown RBP8□□□□□ -1.13
VPS50-218ENST00000485994 TNPO1Q92973 898 aaKnown RBP8□□□□□ -1.13
VPS50-218ENST00000485994 WNT2BQ93097 391 aa8□□□□□ -1.13
VPS50-218ENST00000485994 SCLYQ96I15 445 aa8□□□□□ -1.13
VPS50-218ENST00000485994 ALG1Q9BT22 464 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms