RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ZBTB43O43298 467 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 TCF7P36402 384 aaPredicted RBP29.46■■■□□ 2.31
HLA-F-227ENST00000485513 ARHGAP4P98171 946 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 KRT32Q14532 448 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 RTN1Q16799 776 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 PLEKHG4Q58EX7 1191 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 WWC2Q6AWC2 1192 aa29.46■■■□□ 2.31
HLA-F-227ENST00000485513 CTSHP09668 335 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 ADAM17P78536 824 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 FAM117BQ6P1L5 589 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.45■■■□□ 2.311e-6■□□□□ 10.1
HLA-F-227ENST00000485513 LMBR1Q8WVP7 490 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 SEPT1Q8WYJ6 367 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 JADE2Q9NQC1 790 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 PKD2L1Q9P0L9 805 aa29.45■■■□□ 2.31
HLA-F-227ENST00000485513 NRCAMQ92823 1304 aa29.45■■■□□ 2.3
HLA-F-227ENST00000485513 NAPAP54920 295 aa29.44■■■□□ 2.3
HLA-F-227ENST00000485513 GRB10Q13322 594 aa29.44■■■□□ 2.3
HLA-F-227ENST00000485513 SKIV2LQ15477 1246 aaKnown RBP29.44■■■□□ 2.3
HLA-F-227ENST00000485513 KRT40Q6A162 431 aa29.44■■■□□ 2.3
HLA-F-227ENST00000485513 GSTTP1A0A1W2PQM5 241 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 MAFGO15525 162 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 AMHP03971 560 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 FUT2Q10981 343 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 MKRN4PQ13434 485 aaPredicted RBP29.43■■■□□ 2.3
HLA-F-227ENST00000485513 PPP1R18Q6NYC8 613 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 SEPT8Q92599 483 aa29.43■■■□□ 2.3
HLA-F-227ENST00000485513 COL4A4P53420 1690 aaPredicted RBP29.42■■■□□ 2.3
HLA-F-227ENST00000485513 KLF18A0A0U1RQI7 1052 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 GOLGA8AA7E2F4 631 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 GOLGA8BA8MQT2 603 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 TYW1BQ6NUM6 668 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 TEX2Q8IWB9 1127 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 MYOCDQ8IZQ8 938 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 IL27Q8NEV9 243 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 RIC8AQ9NPQ8 531 aa29.42■■■□□ 2.3
HLA-F-227ENST00000485513 V9GY48 417 aaPredicted RBP29.42■■■□□ 2.3
HLA-F-227ENST00000485513 LINC01553A4QN01 128 aa29.41■■■□□ 2.3
HLA-F-227ENST00000485513 HMGB1P09429 215 aaKnown RBP29.41■■■□□ 2.3
HLA-F-227ENST00000485513 TGS1Q96RS0 853 aaKnown RBP29.41■■■□□ 2.3
HLA-F-227ENST00000485513 OSBPL7Q9BZF2 842 aa29.41■■■□□ 2.3
HLA-F-227ENST00000485513 ERAP1Q9NZ08 941 aa29.41■■■□□ 2.3
HLA-F-227ENST00000485513 INSL6Q9Y581 213 aa29.41■■■□□ 2.3
HLA-F-227ENST00000485513 hCG_1984214I3L0E3 225 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 LPXNO60711 386 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 MARK3P27448 753 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 ADCY7P51828 1080 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 ERVK-21P61565 698 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 PPFIA1Q13136 1202 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 ZNF713Q8N859 430 aaPredicted RBP29.4■■■□□ 2.3
HLA-F-227ENST00000485513 GDPD5Q8WTR4 605 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 GLG1Q92896 1179 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 MXRA8Q9BRK3 442 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 SMARCAD1Q9H4L7 1026 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 MTUS1Q9ULD2 1270 aa29.4■■■□□ 2.3
HLA-F-227ENST00000485513 STXBP3O00186 592 aa29.39■■■□□ 2.3
HLA-F-227ENST00000485513 FOSP01100 380 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-227ENST00000485513 FGD1P98174 961 aa29.39■■■□□ 2.3
HLA-F-227ENST00000485513 FAM26DQ5JW98 314 aa29.39■■■□□ 2.3
HLA-F-227ENST00000485513 ADAMTS19Q8TE59 1207 aa29.39■■■□□ 2.3
HLA-F-227ENST00000485513 JPH1Q9HDC5 661 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-227ENST00000485513 FAM217BQ9NTX9 383 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-227ENST00000485513 NAP1L2Q9ULW6 460 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-227ENST00000485513 TNFRSF10AO00220 468 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 RCAN1P53805 252 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 AAK1Q2M2I8 961 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 TAF2Q6P1X5 1199 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 PGBD1Q96JS3 809 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 ANO3Q9BYT9 981 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 KCNH7Q9NS40 1196 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 BARHL2Q9NY43 387 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 SIP14410 1827 aa29.38■■■□□ 2.29
HLA-F-227ENST00000485513 SMCO2A6NFE2 343 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 CDC27P30260 824 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 HTRA4P83105 476 aaPredicted RBP29.37■■■□□ 2.29
HLA-F-227ENST00000485513 TFF2Q03403 129 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 GRIK4Q16099 956 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 RUFY4Q6ZNE9 571 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 RPAINQ86UA6 219 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 CYP2W1Q8TAV3 490 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 APBB2Q92870 758 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 GLT8D2Q9H1C3 349 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 SUGCTQ9HAC7 445 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 SLC9A2Q9UBY0 812 aa29.37■■■□□ 2.29
HLA-F-227ENST00000485513 KCNB2Q92953 911 aa29.36■■■□□ 2.29
HLA-F-227ENST00000485513 IFIH1Q9BYX4 1025 aaKnown RBP29.36■■■□□ 2.29
HLA-F-227ENST00000485513 LMCD1Q9NZU5 365 aa29.36■■■□□ 2.29
HLA-F-227ENST00000485513 TUBE1Q9UJT0 475 aa29.36■■■□□ 2.29
HLA-F-227ENST00000485513 NCOR1O75376 2440 aa29.36■■■□□ 2.29
HLA-F-227ENST00000485513 CHRNA1P02708 482 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 CPA1P15085 419 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 AP3B2Q13367 1082 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 CEP55Q53EZ4 464 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 RSPH3Q86UC2 560 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 TOP1MTQ969P6 601 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 UHRF1Q96T88 793 aaPredicted RBP29.35■■■□□ 2.29
HLA-F-227ENST00000485513 SDF4Q9BRK5 362 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 COG5Q9UP83 839 aa29.35■■■□□ 2.29
HLA-F-227ENST00000485513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.34■■■□□ 2.29
HLA-F-227ENST00000485513 MBLAC1A4D2B0 266 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms