RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CLIC6Q96NY7 704 aa10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 PKD2L1Q9P0L9 805 aa10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 SLC9A2Q9UBY0 812 aa10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 DDX49Q9Y6V7 483 aaKnown RBP10.15□□□□□ -0.78
SHROOM4-204ENST00000483955 DOCK3Q8IZD9 2030 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 MCM3APO60318 1980 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 ATP9AO75110 1047 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 GGPS1O95749 300 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 GH1P01241 217 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 ZNF865P0CJ78 1059 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 HSPA8P11142 646 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CYBAP13498 195 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 AKR1A1P14550 325 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 MUTP22033 750 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CYP2C19P33261 490 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CAP1Q01518 475 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 GRIN1Q05586 938 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 SPIRE1Q08AE8 756 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 EPHA7Q15375 998 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 NFKBIBQ15653 356 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 IL17AQ16552 155 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 DUSP28Q4G0W2 176 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CELF3Q5SZQ8 465 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC62Q6P9F0 684 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 B3GNT9Q6UX72 402 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CABP7Q86V35 215 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 FSIP1Q8NA03 581 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CALML4Q96GE6 196 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC34Q96HJ3 373 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CDK5RAP3Q96JB5 506 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 NT5C3AQ9H0P0 336 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 MLXIPQ9HAP2 919 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 FAM184BQ9ULE4 1060 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 SAMM50Q9Y512 469 aa10.14□□□□□ -0.79
SHROOM4-204ENST00000483955 FAM237AA0A1B0GTK4 181 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 DDX39AO00148 427 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 NOP56O00567 594 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 FOXN1O15353 648 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 CHMP2AO43633 222 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 DKC1O60832 514 aaKnown RBP eCLIP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 FARP2O94887 1054 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 ARIH2O95376 493 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 CDK11BP21127 795 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 GRK4P32298 578 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 TNFAIP2Q03169 654 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 LAMC2Q13753 1193 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 LY6KQ17RY6 165 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 SKOR2Q2VWA4 1001 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 CCDC144BQ3MJ40 725 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 MIS18BP1Q6P0N0 1132 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 CYFIP1Q7L576 1253 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 DHX37Q8IY37 1157 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 GJA10Q969M2 543 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 PDGFCQ9NRA1 345 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 DISC1Q9NRI5 854 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 PTPN22Q9Y2R2 807 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 Q9Y3F1 56 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 PCDHA10Q9Y5I2 948 aa10.13□□□□□ -0.79
SHROOM4-204ENST00000483955 SEPT4O43236 478 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 MSCO60682 206 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 P4HBP07237 508 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 PSAPP07602 524 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 ELNP15502 786 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 PFKFB1P16118 471 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 RPA1P27694 616 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 SYKP43405 635 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 ACTR2P61160 394 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 SP2Q02086 613 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 FAM160A1Q05DH4 1040 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 BRDTQ58F21 947 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 HYIQ5T013 277 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 OR6J1Q8NGC5 347 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 PPTC7Q8NI37 304 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 SEPT1Q8WYJ6 367 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 ATP6V0A1Q93050 837 aa10.12□□□□□ -0.79
SHROOM4-204ENST00000483955 UIMC1Q96RL1 719 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms