RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 TMEM63BQ5T3F8 832 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 KRT79Q5XKE5 535 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 OLFML2BQ68BL8 750 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 HAUS3Q68CZ6 603 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 ZNF746Q6NUN9 644 aaPredicted RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 SEPT14Q6ZU15 432 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 DPP9Q86TI2 863 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 GRAMD1CQ8IYS0 662 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 IQUBQ8NA54 791 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 CNNM3Q8NE01 707 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 PAGE5Q96GU1 130 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 MPHOSPH6Q99547 160 aaKnown RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 APBA2Q99767 749 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 TINF2Q9BSI4 451 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 TUFT1Q9NNX1 390 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 VTA1Q9NP79 307 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 PDGFCQ9NRA1 345 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 SAGE1Q9NXZ1 904 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 WRAP73Q9P2S5 460 aaPredicted RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 CCDC39Q9UFE4 941 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 DDX41Q9UJV9 622 aaKnown RBP9.26□□□□□ -0.93
USP4-210ENST00000483212 STK24Q9Y6E0 443 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 KDM3AQ9Y4C1 1321 aa9.26□□□□□ -0.93
USP4-210ENST00000483212 MCM3APO60318 1980 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 SYCE3A1L190 88 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 POTEFA5A3E0 1075 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 CTAGE5O15320 804 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 CHMP2AO43633 222 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 ECM2O94769 699 aaPredicted RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 FARP2O94887 1054 aaPredicted RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 SLITRK3O94933 977 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 ATG7O95352 703 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 CCT6AP40227 531 aaKnown RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 RGS2P41220 211 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 STAT6P42226 847 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 JAK3P52333 1124 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 C1QTNF8P60827 252 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 SP3Q02447 781 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 IRF5Q13568 498 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 CCL14Q16627 93 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 KCNV1Q6PIU1 500 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 SPATA20Q8TB22 786 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 NEK9Q8TD19 979 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 RAD54LQ92698 747 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 ERCC4Q92889 916 aaPredicted RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 DYDC2Q96IM9 177 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 PLIN2Q99541 437 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 SDF4Q9BRK5 362 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 TNMDQ9H2S6 317 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 CUEDC2Q9H467 287 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 JPH1Q9HDC5 661 aaPredicted RBP9.25□□□□□ -0.93
USP4-210ENST00000483212 RGL1Q9NZL6 768 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 TUBE1Q9UJT0 475 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 GABRQQ9UN88 632 aa9.25□□□□□ -0.93
USP4-210ENST00000483212 IGKV6D-21A0A0A0MT36 114 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 WDR64B1ANS9 1081 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 GPR25O00155 361 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 LETM1O95202 739 aaPredicted RBP9.24□□□□□ -0.93
USP4-210ENST00000483212 STBD1O95210 358 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 LYPLA2O95372 231 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 ZNF865P0CJ78 1059 aaPredicted RBP9.24□□□□□ -0.93
USP4-210ENST00000483212 CYP2B6P20813 491 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 MUTP22033 750 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 PTGS1P23219 599 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 SFNP31947 248 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 SARSP49591 514 aaKnown RBP9.24□□□□□ -0.93
USP4-210ENST00000483212 ACTR2P61160 394 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 PSMC6P62333 389 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 CYP4A11Q02928 519 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 PRKCZQ05513 592 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 DPYDQ12882 1025 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 PNOCQ13519 176 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
USP4-210ENST00000483212 POSTNQ15063 836 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 UGCGQ16739 394 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 LY6KQ17RY6 165 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 NT5DC1Q5TFE4 455 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 KANK3Q6NY19 840 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 ABHD15Q6UXT9 468 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 MIER3Q7Z3K6 550 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 SMAP1Q8IYB5 467 aaPredicted RBP9.24□□□□□ -0.93
USP4-210ENST00000483212 KCTD17Q8N5Z5 321 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 ERMNQ8TAM6 284 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 COPS5Q92905 334 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 NT5C3AQ9H0P0 336 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 MAGEF1Q9HAY2 307 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms