RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 SSRP1Q08945 709 aaKnown RBP26.82■■□□□ 1.88
RHBDF1-208ENST00000482904 HIC1Q14526 733 aa26.82■■□□□ 1.88
RHBDF1-208ENST00000482904 GLG1Q92896 1179 aa26.82■■□□□ 1.88
RHBDF1-208ENST00000482904 VPS54Q9P1Q0 977 aa26.82■■□□□ 1.88
RHBDF1-208ENST00000482904 SLC9A2Q9UBY0 812 aa26.82■■□□□ 1.88
RHBDF1-208ENST00000482904 ATP2A2P16615 1042 aaKnown RBP26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 THPOP40225 353 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 ANAPC15P60006 121 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 SERINC5Q86VE9 423 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 WNT8BQ93098 351 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 CDX2Q99626 313 aaPredicted RBP26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 RNPEPQ9H4A4 650 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 SETD4Q9NVD3 440 aa26.81■■□□□ 1.88
RHBDF1-208ENST00000482904 ARP10275 920 aa26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 MARK3P27448 753 aa26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 TRIM71Q2Q1W2 868 aaKnown RBP26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 ZNF618Q5T7W0 954 aa26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 AGO4Q9HCK5 861 aaKnown RBP26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 ERAP1Q9NZ08 941 aa26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 SCN5AQ14524 2016 aa26.8■■□□□ 1.88
RHBDF1-208ENST00000482904 GSTTP1A0A1W2PQM5 241 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 TREHO43280 583 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 HOXC8P31273 242 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 NLRP5P59047 1200 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 RASGRP4Q8TDF6 673 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 ZNF576Q9H609 170 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 AZI2Q9H6S1 392 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 NFASCO94856 1347 aa26.79■■□□□ 1.88
RHBDF1-208ENST00000482904 BAIAP3O94812 1187 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 DEXIO95424 95 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 NIPA1Q7RTP0 329 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 PLA2G4DQ86XP0 818 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 LMBR1Q8WVP7 490 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 MYLIPQ8WY64 445 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 SLC9A7Q96T83 725 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 SMARCAD1Q9H4L7 1026 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 SH3GLB2Q9NR46 395 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 EMSYQ7Z589 1322 aa26.78■■□□□ 1.88
RHBDF1-208ENST00000482904 NRCAMQ92823 1304 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 FAM86B1E9PN63 330 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 DDX39AO00148 427 aaKnown RBP26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 MEIS1O00470 390 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 CDKL5O76039 1030 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 FAM86B2P0C5J1 330 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 KCNJ6P48051 423 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 RABGGTBP53611 331 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 SETQ01105 290 aaPredicted RBP26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 PPFIA1Q13136 1202 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 ITGB3BPQ13352 177 aaPredicted RBP26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 CNKSR3Q6P9H4 555 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 SLKQ9H2G2 1235 aaPredicted RBP26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 NKX2-4Q9H2Z4 354 aa26.77■■□□□ 1.88
RHBDF1-208ENST00000482904 RSPH10B2B2RC85 870 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 ADAMTS3O15072 1205 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 NBNO60934 754 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 CTSHP09668 335 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 RSPH10BP0C881 870 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 FOSL2P15408 326 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 ACTR2P61160 394 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 ANKRD1Q15327 319 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 SLC28A3Q9HAS3 691 aa26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 YBX2Q9Y2T7 364 aaKnown RBP26.76■■□□□ 1.87
RHBDF1-208ENST00000482904 CXCL10P02778 98 aa26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 CYP3A4P08684 503 aa26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 TCEAL9Q9UHQ7 104 aa26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 TRPC6Q9Y210 931 aa26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 PCDHA11Q9Y5I1 949 aa26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 LAMA2P24043 3122 aaKnown RBP26.75■■□□□ 1.87
RHBDF1-208ENST00000482904 CAND2O75155 1236 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 SCRN1Q12765 414 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 GRIN2CQ14957 1233 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 GRIK4Q16099 956 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 TRAF7Q6Q0C0 670 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 CRYGNQ8WXF5 182 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 ZNF577Q9BSK1 485 aa26.74■■□□□ 1.87
RHBDF1-208ENST00000482904 IGLV3-22A0A075B6J6 115 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 IPO5O00410 1097 aaKnown RBP26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 LGR5O75473 907 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 GPNMBQ14956 572 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 PRR16Q569H4 304 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 PPP2R2DQ66LE6 453 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 PHOSPHO2Q8TCD6 241 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 UIMC1Q96RL1 719 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 TUBE1Q9UJT0 475 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 TPCN1Q9ULQ1 816 aa26.73■■□□□ 1.87
RHBDF1-208ENST00000482904 BACH1O14867 736 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 AK2P54819 239 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 WDR5P61964 334 aaKnown RBP26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 IGBP1P78318 339 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 MBTPS1Q14703 1052 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 TAF2Q6P1X5 1199 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 TNPO1Q92973 898 aaKnown RBP26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 PCDHA4Q9UN74 947 aa26.72■■□□□ 1.87
RHBDF1-208ENST00000482904 EFCAB14O75071 495 aa26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 MYOGP15173 224 aa26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 HERC6Q8IVU3 1022 aa26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 MAFAQ8NHW3 353 aaPredicted RBP26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 PCYT2Q99447 389 aa26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 C22orf23Q9BZE7 217 aa26.71■■□□□ 1.87
RHBDF1-208ENST00000482904 TRIP12Q14669 1992 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms