RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 CENPTQ96BT3 561 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 CES2O00748 559 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 SERPING1P05155 500 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 PLCG1P19174 1290 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 SFMBT2Q5VUG0 894 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 NUCKS1Q9H1E3 243 aaKnown RBP12.09□□□□□ -0.47
RPGR-208ENST00000482855 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 ABCB11O95342 1321 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 MYH3P11055 1940 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 KLHL33A6NCF5 533 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 CTSWP56202 376 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.48
RPGR-208ENST00000482855 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 TMEM60Q9H2L4 133 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 EME2A4GXA9 379 aaPredicted RBP12.08□□□□□ -0.48
RPGR-208ENST00000482855 ASAP2O43150 1006 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
RPGR-208ENST00000482855 CEP104O60308 925 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 SLC5A1P13866 664 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 FLT3P36888 993 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 CABP7Q86V35 215 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 DHX37Q8IY37 1157 aaKnown RBP12.08□□□□□ -0.48
RPGR-208ENST00000482855 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 AGAP11Q8TF27 550 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 SCFD2Q8WU76 684 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
RPGR-208ENST00000482855 PBKQ96KB5 322 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
RPGR-208ENST00000482855 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
RPGR-208ENST00000482855 F8VZ95 297 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 DAPK3O43293 454 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 MMEP08473 750 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 VEGFAP15692 232 aaPredicted RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 INHBEP58166 350 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 AMPD3Q01432 767 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 DHX9Q08211 1270 aaKnown RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 ADCY2Q08462 1091 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 COBLL1Q53SF7 1204 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 FAM133BQ5BKY9 247 aaKnown RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 RASGRP4Q8TDF6 673 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 AP1M1Q9BXS5 423 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 SMNDC1O75940 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPGR-208ENST00000482855 KIF4AO95239 1232 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 EIF3BP55884 814 aaKnown RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 ZNF268Q14587 947 aaPredicted RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 SLC18A3Q16572 532 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 TRPM8Q7Z2W7 1104 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 HOOK3Q86VS8 718 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ACTRT1Q8TDG2 376 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ANKS1AQ92625 1134 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ZNF317Q96PQ6 595 aaPredicted RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 DDX47Q9H0S4 455 aaKnown RBP12.07□□□□□ -0.48
RPGR-208ENST00000482855 CEP72Q9P209 647 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 ATP6V0A2Q9Y487 856 aa12.07□□□□□ -0.48
RPGR-208ENST00000482855 PGRMC1O00264 195 aaKnown RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 DIAPH2O60879 1101 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 CHN1P15882 459 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 FGFR2P21802 821 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 SF3A3Q12874 501 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPGR-208ENST00000482855 MIS18BP1Q6P0N0 1132 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 SYN2Q92777 582 aaPredicted RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 SELENOSQ9BQE4 189 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 PANK4Q9NVE7 773 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms