RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LMNB2Q03252 620 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 DDR1Q08345 913 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 DUSP4Q13115 394 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 BMS1Q14692 1282 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 DALRD3Q5D0E6 543 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 FILIP1Q7Z7B0 1213 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 C16orf71Q8IYS4 520 aaPredicted RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 RPUSD2Q8IZ73 545 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 SGSM3Q96HU1 749 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 CCDC74BQ96LY2 380 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 KLHL3Q9UH77 587 aa8.29□□□□□ -1.08
CLK1-212ENST00000482590 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 MRPL42Q9Y6G3 142 aaKnown RBP8.29□□□□□ -1.08
CLK1-212ENST00000482590 POLRMTO00411 1230 aaKnown RBP8.28□□□□□ -1.08
CLK1-212ENST00000482590 ENPP3O14638 875 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 DNAJA2O60884 412 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 TOMM70O94826 608 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 EFEMP2O95967 443 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 BMP7P18075 431 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 PSMD2Q13200 908 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 SLC39A6Q13433 755 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 TMC4Q7Z404 712 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 EVI5LQ96CN4 794 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 VWCEQ96DN2 955 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 MRS2Q9HD23 443 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 GABBR1Q9UBS5 961 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 NARFQ9UHQ1 456 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 CNOT6Q9ULM6 557 aaKnown RBP8.28□□□□□ -1.08
CLK1-212ENST00000482590 ZBTB1Q9Y2K1 713 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 LAS1LQ9Y4W2 734 aaKnown RBP8.28□□□□□ -1.08
CLK1-212ENST00000482590 KDM2BQ8NHM5 1336 aa8.28□□□□□ -1.08
CLK1-212ENST00000482590 KDM3BQ7LBC6 1761 aa8.27□□□□□ -1.08
CLK1-212ENST00000482590 HTR3BO95264 441 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 CHRNA5P30532 468 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 TEFQ10587 303 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
CLK1-212ENST00000482590 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
CLK1-212ENST00000482590 RHOVQ96L33 236 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 DDX56Q9NY93 547 aaKnown RBP8.27□□□□□ -1.09
CLK1-212ENST00000482590 KCTD3Q9Y597 815 aa8.27□□□□□ -1.09
CLK1-212ENST00000482590 NUP98P52948 1817 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 SORBS3O60504 671 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 DNAJC6O75061 913 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 CYP19A1P11511 503 aaPredicted RBP8.26□□□□□ -1.09
CLK1-212ENST00000482590 KCNA3P22001 575 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 NLRX1Q86UT6 975 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 CCDC146Q8IYE0 955 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 NME8Q8N427 588 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 KCNC2Q96PR1 638 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 KIF2CQ99661 725 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 ZCCHC4Q9H5U6 513 aa8.26□□□□□ -1.09
CLK1-212ENST00000482590 CARMIL3Q8ND23 1372 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 HEG1Q9ULI3 1381 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 SLX4Q8IY92 1834 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 A0A087WZG4 1122 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 A0A0G2JLL6 359 aaPredicted RBP8.25□□□□□ -1.09
CLK1-212ENST00000482590 STK10O94804 968 aaKnown RBP8.25□□□□□ -1.09
CLK1-212ENST00000482590 STARD3NLO95772 234 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 S100BP04271 92 aaPredicted RBP8.25□□□□□ -1.09
CLK1-212ENST00000482590 TM4SF1P30408 202 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 SSPNQ14714 243 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 NFIXQ14938 502 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 ZNF385BQ569K4 471 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 PHACTR4Q8IZ21 702 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 STAG1Q8WVM7 1258 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 RELTQ969Z4 430 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 MRFAP1L1Q96HT8 127 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 FAM161BQ96MY7 647 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
CLK1-212ENST00000482590 SCN4AP35499 1836 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 NPHP1O15259 732 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 SERPINB2P05120 415 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 TBX4P57082 545 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
CLK1-212ENST00000482590 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 ENOX1Q8TC92 643 aaKnown RBP8.24□□□□□ -1.09
CLK1-212ENST00000482590 CFAP53Q96M91 514 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 TMEM74Q96NL1 305 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 HDAC8Q9BY41 377 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 G3BP2Q9UN86 482 aaKnown RBP8.24□□□□□ -1.09
CLK1-212ENST00000482590 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
CLK1-212ENST00000482590 ANKRD36CQ5JPF3 1778 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 OR14I1A6ND48 311 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 H0YIN7 160 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 RPL10P27635 214 aaKnown RBP8.23□□□□□ -1.09
CLK1-212ENST00000482590 LONRF3Q496Y0 759 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 ADGRF1Q5T601 910 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 ZNF790Q6PG37 636 aa8.23□□□□□ -1.09
CLK1-212ENST00000482590 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms