RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 AMPD3Q01432 767 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 DHX9Q08211 1270 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 SF3A3Q12874 501 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 CEP120Q8N960 986 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 ZNF483Q8TF39 744 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 CALR3Q96L12 384 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 CNOT10Q9H9A5 744 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PNMA2Q9UL42 364 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 ARID5AQ03989 594 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 ZKSCAN8Q15776 578 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PTPROQ16827 1216 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 TMED8Q6PL24 325 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 BZW1Q7L1Q6 419 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 SEC14L1Q92503 715 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PBKQ96KB5 322 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 BATF3Q9NR55 127 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
CNKSR1-207ENST00000482227 A0A0G2JS52 829 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 CAND2O75155 1236 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 FGFR1OPO95684 399 aaKnown RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 TBC1D1Q86TI0 1168 aaPredicted RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 DAGLBQ8NCG7 672 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 ZNF384Q8TF68 577 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 ADAM7Q9H2U9 754 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 TECP42680 631 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 ENOX2Q16206 610 aaKnown RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 UNC13DQ70J99 1090 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 METTL13Q8N6R0 699 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 AGAP11Q8TF27 550 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 SPDL1Q96EA4 605 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 ZNF570Q96NI8 536 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
CNKSR1-207ENST00000482227 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 MTFR1LQ9H019 292 aa17■□□□□ 0.31
CNKSR1-207ENST00000482227 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 ASAP2O43150 1006 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 TTI1O43156 1089 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 CHN1P15882 459 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 KIF5BP33176 963 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 ITIH4Q14624 930 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 DNAAF5Q86Y56 855 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 EGFL6Q8IUX8 553 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 TRPC6Q9Y210 931 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 BTNL10A8MVZ5 291 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 LRRC41Q15345 812 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 FAM133AQ8N9E0 248 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 CELF4Q9BZC1 486 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 EPB41L4BQ9H329 900 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
CNKSR1-207ENST00000482227 PVALEFA0A1B0GWK0 134 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 KRIT1O00522 736 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 MMEP08473 750 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 ALADP13716 330 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 KLHL30Q0D2K2 578 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 GRB10Q13322 594 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 RAPGEF1Q13905 1077 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 SV2BQ7L1I2 683 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 LRRC34Q8IZ02 419 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 ANKS4BQ8N8V4 417 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 ARMC2Q8NEN0 867 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 AIPL1Q9NZN9 384 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 DCCP43146 1447 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 EME2A4GXA9 379 aaPredicted RBP16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 STXBP3O00186 592 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 CYTH3O43739 400 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 PPFIA2O75334 1257 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 SHBGP04278 402 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 GCKP35557 465 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 KANSL2Q9H9L4 492 aa16.98■□□□□ 0.31
CNKSR1-207ENST00000482227 CCNT1O60563 726 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 CDC25CP30307 473 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 MMP13P45452 471 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 KCNJ2P63252 427 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 LETM2Q2VYF4 491 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 DPH5Q9H2P9 285 aa16.97■□□□□ 0.31
CNKSR1-207ENST00000482227 ATP8A1Q9Y2Q0 1164 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms