RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KRT37O76014 449 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 ZBTB7AO95365 584 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 LSSP48449 732 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-210ENST00000482158 NLGN4XQ8N0W4 816 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 ATL2Q8NHH9 583 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.98□□□□□ -1.13
SF3B1-210ENST00000482158 DBR1Q9UK59 544 aaKnown RBP7.98□□□□□ -1.13
SF3B1-210ENST00000482158 ATP23Q9Y6H3 246 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-210ENST00000482158 SCDO00767 359 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 BRINP1O60477 761 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 C4BPAP04003 597 aaKnown RBP7.97□□□□□ -1.13
SF3B1-210ENST00000482158 PTPN1P18031 435 aaKnown RBP7.97□□□□□ -1.13
SF3B1-210ENST00000482158 FBLN1P23142 703 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 VIPR1P32241 457 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 IL2P60568 153 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 GRIN1Q05586 938 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 SLC9A5Q14940 896 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 ZC3H14Q6PJT7 736 aaKnown RBP7.97□□□□□ -1.13
SF3B1-210ENST00000482158 WDR66Q8TBY9 1149 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 EMC7Q9NPA0 242 aa7.97□□□□□ -1.13
SF3B1-210ENST00000482158 HRKO00198 91 aa7.96□□□□□ -1.14
SF3B1-210ENST00000482158 BUB1BO60566 1050 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-210ENST00000482158 JUNBP17275 347 aaPredicted RBP7.96□□□□□ -1.14
SF3B1-210ENST00000482158 SART3Q15020 963 aaKnown RBP7.96□□□□□ -1.14
SF3B1-210ENST00000482158 MIB1Q86YT6 1006 aa7.96□□□□□ -1.14
SF3B1-210ENST00000482158 TRIM48Q8IWZ4 208 aa7.96□□□□□ -1.14
SF3B1-210ENST00000482158 TTLL11Q8NHH1 800 aa7.96□□□□□ -1.14
SF3B1-210ENST00000482158 KCNK12Q9HB15 430 aa7.96□□□□□ -1.14
SF3B1-210ENST00000482158 DDX56Q9NY93 547 aaKnown RBP7.96□□□□□ -1.14
SF3B1-210ENST00000482158 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-210ENST00000482158 H7C1D1 291 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 ABLIM1O14639 778 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 CPEP16870 476 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 SLC9A1P19634 815 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 KPNA1P52294 538 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-210ENST00000482158 BTBD8Q5XKL5 378 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 TMC6Q7Z403 805 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 ZNF605Q86T29 641 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 EFHBQ8N7U6 833 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 KIAA1958Q8N8K9 716 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 ELF4Q99607 663 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-210ENST00000482158 APOBEC2Q9Y235 224 aaKnown RBP7.95□□□□□ -1.14
SF3B1-210ENST00000482158 NUB1Q9Y5A7 615 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 SPO11Q9Y5K1 396 aa7.95□□□□□ -1.14
SF3B1-210ENST00000482158 MYOCOSA0A1B0GUC4 107 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 LRG1P02750 347 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 IRAK1P51617 712 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 ZNF200P98182 395 aaPredicted RBP7.94□□□□□ -1.14
SF3B1-210ENST00000482158 TMEM62Q0P6H9 643 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 PAN2Q504Q3 1202 aaKnown RBP7.94□□□□□ -1.14
SF3B1-210ENST00000482158 RNF219Q5W0B1 726 aaPredicted RBP7.94□□□□□ -1.14
SF3B1-210ENST00000482158 CC2D1AQ6P1N0 951 aaPredicted RBP7.94□□□□□ -1.14
SF3B1-210ENST00000482158 PRR23BQ6ZRT6 265 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 TRIM8Q9BZR9 551 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 KCNH7Q9NS40 1196 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 HOMER2Q9NSB8 354 aa7.94□□□□□ -1.14
SF3B1-210ENST00000482158 ASGR2P07307 311 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 FAHP16930 419 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 PTX3P26022 381 aaPredicted RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 PMLP29590 882 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 GJA4P35212 333 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 THBS2P35442 1172 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 KIF11P52732 1056 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 SMAD3P84022 425 aaKnown RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 TMPRSS15P98073 1019 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 FAM50AQ14320 339 aaKnown RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 SMAD2Q15796 467 aaKnown RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 ATP13A4Q4VNC1 1196 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 BRDTQ58F21 947 aaPredicted RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 CATSPEREQ5SY80 951 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 MPZL3Q6UWV2 235 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 EP400NLQ6ZTU2 488 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 SPATS2Q86XZ4 545 aaKnown RBP7.93□□□□□ -1.14
SF3B1-210ENST00000482158 FAM126BQ8IXS8 530 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 COG1Q8WTW3 980 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 ALG3Q92685 438 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 RIC8BQ9NVN3 520 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 DTLQ9NZJ0 730 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 WASF3Q9UPY6 502 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 IRS2Q9Y4H2 1338 aa7.93□□□□□ -1.14
SF3B1-210ENST00000482158 HIP1RO75146 1068 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
SF3B1-210ENST00000482158 SDHAP31040 664 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 GUCY2FP51841 1108 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
SF3B1-210ENST00000482158 OCRLQ01968 901 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 TMEM132BQ14DG7 1078 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 CR1LQ2VPA4 569 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 ESRP1Q6NXG1 681 aaKnown RBP7.92□□□□□ -1.14
SF3B1-210ENST00000482158 NECAB2Q7Z6G3 386 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 PROSER1Q86XN7 944 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 FAM26EQ8N5C1 309 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 DIRC2Q96SL1 478 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 MCOLN1Q9GZU1 580 aa7.92□□□□□ -1.14
SF3B1-210ENST00000482158 VTA1Q9NP79 307 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms