RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 WIPI1Q5MNZ9 446 aaPredicted RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 FBXO33Q7Z6M2 555 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 GZF1Q9H116 711 aaPredicted RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 ABT1Q9ULW3 272 aaKnown RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 KLRK1P26718 216 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 KCNJ4P48050 445 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 CHRNDQ07001 517 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 GRM1Q13255 1194 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 IFIT5Q13325 482 aaKnown RBP7.68□□□□□ -1.18
VPS50-215ENST00000480943 SEPT6Q14141 434 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 LMBR1LQ6UX01 489 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 SUCLG2Q96I99 432 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 FAM161BQ96MY7 647 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 ANKRD2Q9GZV1 360 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 IRF2BPLQ9H1B7 796 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 ZNF408Q9H9D4 720 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 PRDM10Q9NQV6 1147 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 SMC4Q9NTJ3 1288 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 RTEL1Q9NZ71 1219 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 U3KQE9 123 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 ZNF804BA4D1E1 1349 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 PTPRCP08575 1304 aa7.68□□□□□ -1.18
VPS50-215ENST00000480943 RASSF10A6NK89 507 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 TAF5LO75529 589 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 CELF2O95319 508 aaKnown RBP7.67□□□□□ -1.18
VPS50-215ENST00000480943 VIL1P09327 827 aaKnown RBP7.67□□□□□ -1.18
VPS50-215ENST00000480943 NBPF7P0C2Y1 421 aaPredicted RBP7.67□□□□□ -1.18
VPS50-215ENST00000480943 ERCC3P19447 782 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 TAF1CQ15572 869 aaPredicted RBP7.67□□□□□ -1.18
VPS50-215ENST00000480943 DEFB115Q30KQ5 88 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 ALDH1L2Q3SY69 923 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 AGMOQ6ZNB7 445 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 ARMCX6Q7L4S7 300 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 MXD3Q9BW11 206 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 PGAP2Q9UHJ9 254 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 GTF2IRD1Q9UHL9 959 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 PCDHB5Q9Y5E4 795 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 SNCAIPQ9Y6H5 919 aa7.67□□□□□ -1.18
VPS50-215ENST00000480943 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 OTOFQ9HC10 1997 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ADM5C9JUS6 153 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 SNAP23O00161 211 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ETV2O00321 342 aaPredicted RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 PLIN1O60240 522 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 LRIG2O94898 1065 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 RLBP1P12271 317 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ITIH2P19823 946 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ST13P50502 369 aaKnown RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 OXCT1P55809 520 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 KRTAP10-2P60368 255 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ETF1P62495 437 aaKnown RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 NFKB2Q00653 900 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 CCDC57Q2TAC2 916 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 CST9Q5W186 159 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 CYP4F22Q6NT55 531 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 DLK2Q6UY11 383 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 LDHAL6AQ6ZMR3 332 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 USP48Q86UV5 1035 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 TRMT2AQ8IZ69 625 aaKnown RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 AGBL3Q8NEM8 1001 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 DCPSQ96C86 337 aaKnown RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 WNT10AQ9GZT5 417 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 COA1Q9GZY4 146 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 CNNM1Q9NRU3 951 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 GGA3Q9NZ52 723 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 ASTN2O75129 1339 aaPredicted RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 WDR33Q9C0J8 1336 aaKnown RBP7.66□□□□□ -1.18
VPS50-215ENST00000480943 CASP8AP2Q9UKL3 1982 aa7.66□□□□□ -1.18
VPS50-215ENST00000480943 UTYO14607 1347 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 LAMB1P07942 1786 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 CELA3BP08861 270 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 CDK8P49336 464 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 ZNF280AP59817 542 aaPredicted RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 ZXDCQ2QGD7 858 aaPredicted RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 DACT2Q5SW24 774 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 AK9Q5TCS8 1911 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 KRT26Q7Z3Y9 468 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 MYO3BQ8WXR4 1341 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 KCNN1Q92952 543 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 CRELD1Q96HD1 420 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 KAZALD1Q96I82 304 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 CAPNS2Q96L46 248 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 HEXIM2Q96MH2 286 aaKnown RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 GMLQ99445 158 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 TNKS2Q9H2K2 1166 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 BICC1Q9H694 974 aaKnown RBP7.65□□□□□ -1.18
VPS50-215ENST00000480943 FBRSQ9HAH7 460 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 MYOZ2Q9NPC6 264 aa7.65□□□□□ -1.18
VPS50-215ENST00000480943 IRS2Q9Y4H2 1338 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 FOXN1O15353 648 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 SORBS3O60504 671 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 CTSHP09668 335 aa7.64□□□□□ -1.19
VPS50-215ENST00000480943 ECE1P42892 770 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms