RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DARS2Q6PI48 645 aaKnown RBP10.27□□□□□ -0.76
VEGFA-212ENST00000480614 RNF207Q6ZRF8 634 aa10.27□□□□□ -0.76
VEGFA-212ENST00000480614 ZSCAN20P17040 1043 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 KCNA4P22459 653 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ARHGDIAP52565 204 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 FSCBQ5H9T9 825 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 CEP19Q96LK0 163 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ZMAT2Q96NC0 199 aaKnown RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 DHX36Q9H2U1 1008 aaKnown RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 PDE11AQ9HCR9 933 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 PLEKHG3A1L390 1219 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 INO80B-WBP1J3KQ70 363 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 SERPING1P05155 500 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 KIF2CQ99661 725 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 INO80BQ9C086 356 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TNNQ9UQP3 1299 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 NINQ8N4C6 2090 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 IGSF3O75054 1194 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 LIG3P49916 1009 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ENOX1Q8TC92 643 aaKnown RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 P2RX5Q93086 422 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 MAGEB5Q9BZ81 275 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 EDEM3Q9BZQ6 932 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 MYH8P13535 1937 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 E9PMD0 336 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 MAN1A2O60476 641 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TOM1L1O75674 476 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 PODNQ7Z5L7 613 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TMCO5AQ8N6Q1 288 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ASPSCR1Q9BZE9 553 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 PARVGQ9HBI0 331 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 MYH15Q9Y2K3 1946 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ZBED1O96006 694 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 LRRC47Q8N1G4 583 aaKnown RBP10.27□□□□□ -0.77
VEGFA-212ENST00000480614 NEK9Q8TD19 979 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ZNF804BA4D1E1 1349 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 H3BRJ5 948 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 MAPK13O15264 365 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TJP3O95049 919 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ELF1P32519 619 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 TRIM59Q8IWR1 403 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 DEPDC1BQ8WUY9 529 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
VEGFA-212ENST00000480614 CTNND1O60716 968 aaKnown RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 TMED2Q15363 201 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 NEUROG2Q9H2A3 272 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 THAP9Q9H5L6 903 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 CYP26B1Q9NR63 512 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 RAP1GDS1P52306 607 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 MAP3K10Q02779 954 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 EMBQ6PCB8 327 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ZBTB9Q96C00 473 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 PLEKHG1Q9ULL1 1385 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 FRA10AC1Q70Z53 315 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 GPKOWQ92917 476 aaPredicted RBP eCLIP10.26□□□□□ -0.779e-7■□□□□ 11
VEGFA-212ENST00000480614 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 OCRLQ01968 901 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 MCUQ8NE86 351 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 PLS3P13797 630 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 CAPN12Q6ZSI9 719 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 SSH3Q8TE77 659 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 MAP3K15Q6ZN16 1313 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 KRT37O76014 449 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 KRT33BQ14525 404 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ARHGEF25Q86VW2 580 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 FAM167AQ96KS9 214 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 GPR108Q9NPR9 543 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 KRT24Q2M2I5 525 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 RNF219Q5W0B1 726 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ACAD11Q709F0 780 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 PI4K2BQ8TCG2 481 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 TRIM62Q9BVG3 475 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ZNF608Q9ULD9 1512 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 RECQLP46063 649 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 STAMQ92783 540 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 USP21Q9UK80 565 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 RNF123Q5XPI4 1314 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 EPHB1P54762 984 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 C17orf53Q8N3J3 647 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
VEGFA-212ENST00000480614 TRPV6Q9H1D0 765 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 ADGRL2O95490 1459 aa10.26□□□□□ -0.77
VEGFA-212ENST00000480614 PNMA6EA0A0J9YXQ4 647 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CALB1P05937 261 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 RRP15Q9Y3B9 282 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms