RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 AGO4Q9HCK5 861 aaKnown RBP30.97■■■□□ 2.55
TNFRSF25-213ENST00000480393 LOC285556D6RIA3 1793 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 A0A0G2JLL6 359 aaPredicted RBP30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 NPHP3-ACAD11A0A0J9YXS1 232 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 DDX39AO00148 427 aaKnown RBP30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 IRF6O14896 467 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 MUTP22033 750 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 CCND2P30279 289 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 NOLC1Q14978 699 aaKnown RBP eCLIP30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 ARMCX5Q6P1M9 558 aa30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 PRRT2Q7Z6L0 340 aaPredicted RBP30.96■■■□□ 2.55
TNFRSF25-213ENST00000480393 SKILP12757 684 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 EEF1GP26641 437 aaKnown RBP30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 RAD51AP2Q09MP3 1159 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 ANKRD40Q6AI12 368 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 DUSP9Q99956 384 aaKnown RBP30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 MAF1Q9H063 256 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 BHMT2Q9H2M3 363 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 TAB2Q9NYJ8 693 aa30.95■■■□□ 2.55
TNFRSF25-213ENST00000480393 CXCL11O14625 94 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 SLITRK3O94933 977 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 COPB1P53618 953 aaKnown RBP30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 IRX3P78415 501 aaPredicted RBP30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 CACNB1Q02641 598 aaPredicted RBP30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 MIER3Q7Z3K6 550 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 FAM114A1Q8IWE2 563 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 NEK9Q8TD19 979 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 PURBQ96QR8 312 aaKnown RBP30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 ZHX3Q9H4I2 956 aa30.95■■■□□ 2.54
TNFRSF25-213ENST00000480393 N4BP3O15049 544 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 CCZ1BP86790 482 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 CCZ1P86791 482 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 PPIL2Q13356 520 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 ARSHQ5FYA8 562 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 HERC4Q5GLZ8 1057 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 B3GNT9Q6UX72 402 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 MYOCDQ8IZQ8 938 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 MB21D1Q8N884 522 aa30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 NSUN6Q8TEA1 469 aaKnown RBP30.94■■■□□ 2.54
TNFRSF25-213ENST00000480393 A1CFQ9NQ94 594 aaKnown RBP30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 TBC1D22BQ9NU19 505 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 CYP39A1Q9NYL5 469 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 CLEC11AQ9Y240 323 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 TESPA1A2RU30 521 aaPredicted RBP30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 TEX33O43247 280 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 CENPPQ6IPU0 288 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 CHST13Q8NET6 341 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 TSG101Q99816 390 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 VPS16Q9H269 839 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 SEMA6BQ9H3T3 888 aa30.93■■■□□ 2.54
TNFRSF25-213ENST00000480393 LRRC10BA6NIK2 292 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 ITGB3BPQ13352 177 aaPredicted RBP30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 LRRC41Q15345 812 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 LBX2Q6XYB7 198 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 IRF2BP1Q8IU81 584 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 NACC1Q96RE7 527 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 SPTLC3Q9NUV7 552 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 TBC1D7Q9P0N9 293 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 TCEAL9Q9UHQ7 104 aa30.92■■■□□ 2.54
TNFRSF25-213ENST00000480393 FRMD3A2A2Y4 597 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 KIF20AO95235 890 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 NR3C2P08235 984 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 TBX2Q13207 712 aaPredicted RBP30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 GIT2Q14161 759 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 PIGOQ8TEQ8 1089 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 OPTNQ96CV9 577 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 REEP2Q9BRK0 252 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 LXNQ9BS40 222 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 KCNH4Q9UQ05 1017 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 A0A0G2JMZ2 1700 aa30.91■■■□□ 2.54
TNFRSF25-213ENST00000480393 TBCAO75347 108 aaKnown RBP30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 TPM2P07951 284 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 LRRC63Q05C16 580 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 NLRX1Q86UT6 975 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 DHX15O43143 795 aaKnown RBP30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 FGFR1OPO95684 399 aaKnown RBP30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 BANK1Q8NDB2 785 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 RUSC1Q9BVN2 902 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 FBXO40Q9UH90 709 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 SAMM50Q9Y512 469 aa30.9■■■□□ 2.54
TNFRSF25-213ENST00000480393 VSIG10LQ86VR7 867 aa30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 GLIS3Q8NEA6 775 aa30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 CCDC112Q8NEF3 446 aa30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 GPRASP2Q96D09 838 aa30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 CNOT6LQ96LI5 555 aaKnown RBP30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 AGTPBP1Q9UPW5 1226 aa30.89■■■□□ 2.54
TNFRSF25-213ENST00000480393 PPFIBP1Q86W92 1011 aa30.88■■■□□ 2.53
TNFRSF25-213ENST00000480393 BTBD7Q9P203 1132 aa30.88■■■□□ 2.53
TNFRSF25-213ENST00000480393 PCDHA2Q9Y5H9 948 aa30.88■■■□□ 2.53
TNFRSF25-213ENST00000480393 PBX1P40424 430 aa30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 RIOX2Q8IUF8 465 aa30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 PES1O00541 588 aaKnown RBP30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 P4HBP07237 508 aaKnown RBP30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 RINT1Q6NUQ1 792 aa30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 SFR1Q86XK3 245 aa30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 ANKRD35Q8N283 1001 aa30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 ASCC2Q9H1I8 757 aaPredicted RBP30.87■■■□□ 2.53
TNFRSF25-213ENST00000480393 PFASO15067 1338 aa30.86■■■□□ 2.53
TNFRSF25-213ENST00000480393 ITIH6Q6UXX5 1313 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms