RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
USP54-212ENST00000480210 PLPPR4Q7Z2D5 763 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 NECAB2Q7Z6G3 386 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 NEK9Q8TD19 979 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 COPS5Q92905 334 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
USP54-212ENST00000480210 MAP7D2Q96T17 732 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 GPR20Q99678 358 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 MTG1Q9BT17 334 aaPredicted RBP9.31□□□□□ -0.92
USP54-212ENST00000480210 SMARCAD1Q9H4L7 1026 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 AZI2Q9H6S1 392 aa9.31□□□□□ -0.92
USP54-212ENST00000480210 ZNF215Q9UL58 517 aaPredicted RBP9.31□□□□□ -0.92
USP54-212ENST00000480210 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
USP54-212ENST00000480210 FAM205CA6NFA0 338 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 CTAGE5O15320 804 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ADCY6O43306 1168 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 SLC37A4O43826 429 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 LGR5O75473 907 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
USP54-212ENST00000480210 ASGR1P07306 291 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
USP54-212ENST00000480210 ACLYP53396 1101 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
USP54-212ENST00000480210 PTGDRQ13258 359 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ITGB3BPQ13352 177 aaPredicted RBP9.3□□□□□ -0.92
USP54-212ENST00000480210 EPHA7Q15375 998 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 HSDL1Q3SXM5 330 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ANO1Q5XXA6 986 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ABHD15Q6UXT9 468 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 MIER3Q7Z3K6 550 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 ERMNQ8TAM6 284 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 AFAP1L1Q8TED9 768 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 AFG1LQ8WV93 481 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 HAS1Q92839 578 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 FERMT2Q96AC1 680 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 C11orf49Q9H6J7 331 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
USP54-212ENST00000480210 PCDHB6Q9Y5E3 794 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
USP54-212ENST00000480210 MROH7Q68CQ1 1323 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
USP54-212ENST00000480210 EVPLQ92817 2033 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 IGKV6D-21A0A0A0MT36 114 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 A0A0U1RQG5 324 aaPredicted RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 GSTTP1A0A1W2PQM5 241 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 YEATS4O95619 227 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 P4HBP07237 508 aaKnown RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 MYL3P08590 195 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 SUPT20HL2P0C7V6 817 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 GNAT1P11488 350 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 XRCC6P12956 609 aaKnown RBP eCLIP9.29□□□□□ -0.92
USP54-212ENST00000480210 DDIT3P35638 169 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 TCF7P36402 384 aaPredicted RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 TXKP42681 527 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 STAT5BP51692 787 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 ACTR2P61160 394 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 PURAQ00577 322 aaKnown RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 GJC2Q5T442 439 aaPredicted RBP9.29□□□□□ -0.92
USP54-212ENST00000480210 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 FERMT3Q86UX7 667 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 POTEDQ86YR6 584 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 EXOC8Q8IYI6 725 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 C4orf32Q8N8J7 132 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 ATP6V0A1Q93050 837 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 FAM167AQ96KS9 214 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 AK8Q96MA6 479 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 HTATIP2Q9BUP3 242 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 STARD7Q9NQZ5 370 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 DISC1Q9NRI5 854 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 NRBP2Q9NSY0 501 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 ERAP1Q9NZ08 941 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 CHMP5Q9NZZ3 219 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 SAMM50Q9Y512 469 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
USP54-212ENST00000480210 POTEFA5A3E0 1075 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 RRN3P2A6NIE6 340 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 H3BRB1 525 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 HAS3O00219 553 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 PPP6R2O75170 966 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 F2P00734 622 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 LGALS2P05162 132 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 COL6A1P12109 1028 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 EN2P19622 333 aaPredicted RBP9.28□□□□□ -0.92
USP54-212ENST00000480210 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
USP54-212ENST00000480210 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
USP54-212ENST00000480210 PSMC5P62195 406 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 KRT85P78386 507 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 BEX3Q00994 111 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 SLC39A14Q15043 492 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
USP54-212ENST00000480210 HAUS3Q68CZ6 603 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 MTERF4Q7Z6M4 381 aaKnown RBP9.28□□□□□ -0.92
USP54-212ENST00000480210 SESTD1Q86VW0 696 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 GLG1Q92896 1179 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
USP54-212ENST00000480210 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms