RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 PPTC7Q8NI37 304 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 PI4K2BQ8TCG2 481 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 OTUD7AQ8TE49 926 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-211ENST00000479625 NSUN6Q8TEA1 469 aaKnown RBP11.36□□□□□ -0.59
GPNMB-211ENST00000479625 SEPT8Q92599 483 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 RMDN3Q96TC7 470 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 TREHO43280 583 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 FGRP09769 529 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 MS4A1P11836 297 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 HOXD8P13378 290 aaPredicted RBP11.35□□□□□ -0.59
GPNMB-211ENST00000479625 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 LAMC2Q13753 1193 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 SUGP1Q8IWZ8 645 aaKnown RBP11.35□□□□□ -0.59
GPNMB-211ENST00000479625 FIBCD1Q8N539 461 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 ATP6V0A1Q93050 837 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 CD207Q9UJ71 328 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 CACNA1AO00555 2505 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 ABCB11O95342 1321 aa11.35□□□□□ -0.59
GPNMB-211ENST00000479625 C17orf102A2RUQ5 167 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 C5orf67F2Z3F1 127 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 HRO43593 1189 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 RGS20O76081 388 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 GGPS1O95749 300 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 NDUFV1P49821 464 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 HAND2P61296 217 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 ARHGEF16Q5VV41 709 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 FBXL6Q8N531 539 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 IL31RAQ8NI17 732 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
GPNMB-211ENST00000479625 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 C16orf70Q9BSU1 422 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 C11orf84Q9BUA3 381 aaPredicted RBP11.34□□□□□ -0.59
GPNMB-211ENST00000479625 LMAN2LQ9H0V9 348 aa11.34□□□□□ -0.59
GPNMB-211ENST00000479625 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
GPNMB-211ENST00000479625 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
GPNMB-211ENST00000479625 DMXL1Q9Y485 3027 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 TTC3P53804 2025 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 NCK2O43639 380 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 EIF3JO75822 258 aaKnown RBP11.33□□□□□ -0.6
GPNMB-211ENST00000479625 CFBP00751 764 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 MMP1P03956 469 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 NR3C2P08235 984 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 SMIM10L2AP0DMW4 78 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 SMIM10L2BP0DMW5 78 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 UBA1P22314 1058 aaKnown RBP11.33□□□□□ -0.6
GPNMB-211ENST00000479625 HOXC8P31273 242 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 BMPR1AP36894 532 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 ZXDAP98168 799 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 SP2Q02086 613 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 CAMK1Q14012 370 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 SPATA33Q96N06 139 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 TCP11L1Q9NUJ3 509 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 FNDC1Q4ZHG4 1894 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-211ENST00000479625 NEDD4P46934 1319 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 TTC41PQ6P2S7 1318 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
GPNMB-211ENST00000479625 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 LOC730098B7Z3J9 87 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 OPLAHO14841 1288 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 GLP2RO95838 553 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 LGALS2P05162 132 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 MYCLP12524 364 aaPredicted RBP11.32□□□□□ -0.6
GPNMB-211ENST00000479625 DNAJB1P25685 340 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
GPNMB-211ENST00000479625 ADAM15Q13444 863 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
GPNMB-211ENST00000479625 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 TBC1D10CQ8IV04 446 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
GPNMB-211ENST00000479625 RNPEPQ9H4A4 650 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 CLEC1BQ9P126 229 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 BARX2Q9UMQ3 279 aaPredicted RBP11.32□□□□□ -0.6
GPNMB-211ENST00000479625 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
GPNMB-211ENST00000479625 DNAH14Q0VDD8 3507 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 H0Y858 1186 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 H3BRB1 525 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 EYA4O95677 639 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 PDGFBP01127 241 aaPredicted RBP11.31□□□□□ -0.6
GPNMB-211ENST00000479625 FGAP02671 866 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 RB1P06400 928 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 GHRP10912 638 aa11.31□□□□□ -0.6
GPNMB-211ENST00000479625 RBM10P98175 930 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms