RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CETPP11597 493 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 SELPP16109 830 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 MCM5P33992 734 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 INHBEP58166 350 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 PABPC4Q13310 644 aaKnown RBP eCLIP7.21□□□□□ -1.261e-6■■□□□ 14.5
SF3B1-209ENST00000479532 COL9A3Q14050 684 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-209ENST00000479532 SEPT2Q15019 361 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 FAM47AQ5JRC9 791 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 SAMD5Q5TGI4 173 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 ALG1LQ6GMV1 187 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 CYP4F22Q6NT55 531 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 FASTKD5Q7L8L6 764 aaKnown RBP7.21□□□□□ -1.26
SF3B1-209ENST00000479532 LENG1Q96BZ8 264 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-209ENST00000479532 WDR18Q9BV38 432 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 BRD7Q9NPI1 651 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 TCP11L1Q9NUJ3 509 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 FOXD3Q9UJU5 478 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-209ENST00000479532 PHIPQ8WWQ0 1821 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 NEDD4P46934 1319 aa7.21□□□□□ -1.26
SF3B1-209ENST00000479532 GREB1LQ9C091 1923 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-209ENST00000479532 TRIM75PA6NK02 468 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 TNFRSF21O75509 655 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 TCF3P15923 654 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 SSTR4P31391 388 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 MAP2K2P36507 400 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 ANAPC15P60006 121 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 RAC1P63000 192 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 SPP2Q13103 211 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
SF3B1-209ENST00000479532 RRP1BQ14684 758 aaKnown RBP7.2□□□□□ -1.26
SF3B1-209ENST00000479532 PDE12Q6L8Q7 609 aaKnown RBP7.2□□□□□ -1.26
SF3B1-209ENST00000479532 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 GADL1Q6ZQY3 521 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 SNX29Q8TEQ0 813 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 CEP95Q96GE4 821 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 TMEM87BQ96K49 555 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 TTC14Q96N46 770 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 NEK1Q96PY6 1258 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 MTA3Q9BTC8 594 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 MTMR4Q9NYA4 1195 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 NYAP2Q9P242 653 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 SYNPO2Q9UMS6 1093 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 STX8Q9UNK0 236 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 AFG3L2Q9Y4W6 797 aa7.2□□□□□ -1.26
SF3B1-209ENST00000479532 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
SF3B1-209ENST00000479532 PTPRFP10586 1907 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 LOC285556D6RIA3 1793 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CCL15-CCL14A0A0B4J2E2 113 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 A0A0G2JLL6 359 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 SMIM22K7EJ46 135 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 IFIT3O14879 490 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CPNE3O75131 537 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 SIN3BO75182 1162 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 XYLBO75191 536 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 ALBP02768 609 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 FAM157BP0CG42 384 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 TOP1P11387 765 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CASTP20810 708 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 BACE1P56817 501 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 PSMD2Q13200 908 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 WTAPQ15007 396 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 ZYXQ15942 572 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CCL15Q16663 113 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 IFIT1BQ5T764 474 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 XKR5Q6UX68 686 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 SYNE3Q6ZMZ3 975 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 PRRT2Q7Z6L0 340 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 DGKHQ86XP1 1220 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 FBF1Q8TES7 1133 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 LPAR1Q92633 364 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 KCNB2Q92953 911 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 JAKMIP1Q96N16 626 aaKnown RBP7.19□□□□□ -1.26
SF3B1-209ENST00000479532 C22orf23Q9BZE7 217 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 KIAA1683Q9H0B3 1180 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 KAT14Q9H8E8 782 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 INCENPQ9NQS7 918 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 TMEM63CQ9P1W3 806 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 ZSWIM5Q9P217 1185 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CLIP2Q9UDT6 1046 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 KCNH4Q9UQ05 1017 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 TMX2Q9Y320 296 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 SNX14Q9Y5W7 946 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 CYP46A1Q9Y6A2 500 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 TNKSO95271 1327 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 WDR19Q8NEZ3 1342 aa7.19□□□□□ -1.26
SF3B1-209ENST00000479532 IGKV6D-41A0A0C4DH26 115 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 CCDC69A6NI79 296 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 WDR46O15213 610 aaKnown RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 PRC1O43663 620 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 PHACTR2O75167 634 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 NID1P14543 1247 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 GUCY1A2P33402 732 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 HMGCS2P54868 508 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 251.6 ms