RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FCHSD1Q86WN1 690 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 LMBR1Q8WVP7 490 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 GPR20Q99678 358 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 KRT23Q9C075 422 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 IGFLR1Q9H665 355 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 ZNF318Q5VUA4 2279 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 TMEM221A6NGB7 291 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 M0R296 226 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 FIBPO43427 364 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 ST18O60284 1047 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 ICAM3P32942 547 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 ADAM17P78536 824 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 IMMTQ16891 758 aaKnown RBP18.63■□□□□ 0.57
DDX56-210ENST00000479440 TRIM67Q6ZTA4 783 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 CYFIP1Q7L576 1253 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 TRIM50Q86XT4 487 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 HOMER1Q86YM7 354 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 STAG2Q8N3U4 1231 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 P2RX5Q93086 422 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 PBXIP1Q96AQ6 731 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 ZFP91Q96JP5 570 aaPredicted RBP18.63■□□□□ 0.57
DDX56-210ENST00000479440 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
DDX56-210ENST00000479440 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 FRMPD4Q14CM0 1322 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 NRCAMQ92823 1304 aa18.63■□□□□ 0.57
DDX56-210ENST00000479440 LINC01565O15544 149 aa18.62■□□□□ 0.57
DDX56-210ENST00000479440 EYA4O95677 639 aa18.62■□□□□ 0.57
DDX56-210ENST00000479440 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDX56-210ENST00000479440 ADAM15Q13444 863 aa18.62■□□□□ 0.57
DDX56-210ENST00000479440 NAALADL2Q58DX5 795 aa18.62■□□□□ 0.57
DDX56-210ENST00000479440 ZNF689Q96CS4 500 aaPredicted RBP18.62■□□□□ 0.57
DDX56-210ENST00000479440 PHOX2BQ99453 314 aa18.62■□□□□ 0.57
DDX56-210ENST00000479440 SDSP20132 328 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 MGAT3Q09327 533 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 UTP14CQ5TAP6 766 aaKnown RBP18.61■□□□□ 0.57
DDX56-210ENST00000479440 CMTR2Q8IYT2 770 aaKnown RBP18.61■□□□□ 0.57
DDX56-210ENST00000479440 SMRP1Q8NCR6 262 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 MSLNLQ96KJ4 702 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 EHMT1Q9H9B1 1298 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
DDX56-210ENST00000479440 SPATA31C2B4DYI2 1134 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 CHRNA1P02708 482 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 LPIN1Q14693 890 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 TSHZ1Q6ZSZ6 1077 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 EFHBQ8N7U6 833 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 ALG13Q9NP73 1137 aaKnown RBP18.6■□□□□ 0.57
DDX56-210ENST00000479440 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
DDX56-210ENST00000479440 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
DDX56-210ENST00000479440 LOC730098B7Z3J9 87 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 DGKIO75912 1065 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 RPLP2P05387 115 aaKnown RBP18.59■□□□□ 0.57
DDX56-210ENST00000479440 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
DDX56-210ENST00000479440 ZXDAP98168 799 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 SP4Q02446 784 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 COASYQ13057 564 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 SEMA3FQ13275 785 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
DDX56-210ENST00000479440 FBXL6Q8N531 539 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 SENP7Q9BQF6 1050 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 IRF2BPLQ9H1B7 796 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 BCAS3Q9H6U6 928 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 TUBE1Q9UJT0 475 aa18.59■□□□□ 0.57
DDX56-210ENST00000479440 FSD2A1L4K1 749 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 ENPP3O14638 875 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 PPFIA1Q13136 1202 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 FBXO47Q5MNV8 452 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 IER5LQ5T953 404 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 CWC27Q6UX04 472 aaKnown RBP18.58■□□□□ 0.56
DDX56-210ENST00000479440 RUFY4Q6ZNE9 571 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 NLRX1Q86UT6 975 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 NPAS4Q8IUM7 802 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.56
DDX56-210ENST00000479440 PIGSQ96S52 555 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 FTHL17Q9BXU8 183 aa18.58■□□□□ 0.56
DDX56-210ENST00000479440 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.56
DDX56-210ENST00000479440 HIP1O00291 1037 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
DDX56-210ENST00000479440 SIGLEC14Q08ET2 396 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 TCF15Q12870 199 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 CAMK1Q14012 370 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 CBX2Q14781 532 aaPredicted RBP18.57■□□□□ 0.56
DDX56-210ENST00000479440 SEC23AQ15436 765 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 XRRA1Q6P2D8 792 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 PHF7Q9BWX1 381 aaPredicted RBP18.57■□□□□ 0.56
DDX56-210ENST00000479440 RIOX1Q9H6W3 641 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 RTEL1Q9NZ71 1219 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 CLEC1BQ9P126 229 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
DDX56-210ENST00000479440 CDY2AQ9Y6F7 541 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 WDFY4Q6ZS81 3184 aa18.57■□□□□ 0.56
DDX56-210ENST00000479440 PNMA6FA0A0J9YX94 578 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 GFRA3O60609 400 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 ITGB1P05556 798 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 STAG3L1P0CL83 205 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 TCF7P36402 384 aaPredicted RBP18.56■□□□□ 0.56
DDX56-210ENST00000479440 NRIP1P48552 1158 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms