RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SCG2P13521 617 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 SLC16A2P36021 539 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 AKAP17AQ02040 695 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 FMR1Q06787 632 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP48-208ENST00000479177 RESTQ13127 1097 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 ZYXQ15942 572 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 PFKFB3Q16875 520 aaPredicted RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 LDLRAD1Q5T700 205 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 KRT40Q6A162 431 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 OTUD7BQ6GQQ9 843 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 BTNL9Q6UXG8 535 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 ARMC9Q7Z3E5 817 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 RAB44Q7Z6P3 723 aaPredicted RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 ANKRD13AQ8IZ07 590 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 GOLGA6L1Q8N7Z2 621 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 FBXO18Q8NFZ0 1043 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 LPAR1Q92633 364 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 TNPO1Q92973 898 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 MTMR8Q96EF0 704 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 RRP36Q96EU6 259 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 CLMNQ96JQ2 1002 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 C12orf42Q96LP6 360 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 KRTAP4-12Q9BQ66 201 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 UBA5Q9GZZ9 404 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 AS3MTQ9HBK9 375 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 BRD7Q9NPI1 651 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 GJB4Q9NTQ9 266 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 MARK1Q9P0L2 795 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 DMGDHQ9UI17 866 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 ISY1Q9ULR0 285 aaKnown RBP7.66□□□□□ -1.18
USP48-208ENST00000479177 CSADQ9Y600 493 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 A0A0G2JMZ2 1700 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 TRIM75PA6NK02 468 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 TMEM232C9JQI7 657 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 H3BQV1 296 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 STXBP3O00186 592 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 GNB5O14775 395 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 WDR46O15213 610 aaKnown RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 PLA2G6O60733 806 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 VCAM1P19320 739 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 GRNP28799 593 aaKnown RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 USP14P54578 494 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 BACE1P56817 501 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 PCBP4P57723 403 aaKnown RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 FKBP1BP68106 108 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 GUCY1B3Q02153 619 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 KIF23Q02241 960 aaPredicted RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 TCHHQ07283 1943 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 SPP2Q13103 211 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 FOXD4L6Q3SYB3 417 aaPredicted RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 SYDE2Q5VT97 1194 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 WWC2Q6AWC2 1192 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 FOXD4L3Q6VB84 417 aaPredicted RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 CLEC17AQ6ZS10 378 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 ERO1BQ86YB8 467 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 ADGRF4Q8IZF3 695 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 PIBF1Q8WXW3 757 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 PIGSQ96S52 555 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 ELP3Q9H9T3 547 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 JMJD4Q9H9V9 463 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 GBA2Q9HCG7 927 aaPredicted RBP7.65□□□□□ -1.18
USP48-208ENST00000479177 VPS54Q9P1Q0 977 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 SEPT3Q9UH03 358 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 AFG3L2Q9Y4W6 797 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 ZHX2Q9Y6X8 837 aa7.65□□□□□ -1.18
USP48-208ENST00000479177 PASKQ96RG2 1323 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PNMA6FA0A0J9YX94 578 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 UNCXA6NJT0 531 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 KIF28PB7ZC32 967 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 C19orf81C9J6K1 198 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 ZBTB5O15062 677 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PPP1R11O60927 126 aaPredicted RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 CELF2O95319 508 aaKnown RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 MMP1P03956 469 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 DGKGP49619 791 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 STAT2P52630 851 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 HMGCS2P54868 508 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PPATQ06203 517 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PPIL2Q13356 520 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 TRIM29Q14134 588 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 NPY5RQ15761 445 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 CDC37Q16543 378 aaPredicted RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 QRICH1Q2TAL8 776 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 SLCO4C1Q6ZQN7 724 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 HEATR3Q7Z4Q2 680 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 FERMT3Q86UX7 667 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 FAM160B2Q86V87 743 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 HOMER1Q86YM7 354 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 ZNF713Q8N859 430 aaPredicted RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 MYO19Q96H55 970 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PHF20Q9BVI0 1012 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 SH3GLB2Q9NR46 395 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 BARHL2Q9NY43 387 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms