RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 KCNK18Q7Z418 384 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 KIAA1328Q86T90 577 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 EHBP1Q8NDI1 1231 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 HAS1Q92839 578 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 JAKMIP2Q96AA8 810 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 PNKPQ96T60 521 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 FBXO28Q9NVF7 368 aa30.49■■■□□ 2.47
CHKB-208ENST00000479003 KRT86O43790 486 aa30.48■■■□□ 2.47
CHKB-208ENST00000479003 GCFC2P16383 781 aaKnown RBP30.48■■■□□ 2.47
CHKB-208ENST00000479003 PTPRAP18433 802 aa30.48■■■□□ 2.47
CHKB-208ENST00000479003 DDX12PQ92771 950 aa30.48■■■□□ 2.47
CHKB-208ENST00000479003 MAN2A1Q16706 1144 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 USH1GQ495M9 461 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 USP50Q70EL3 339 aaPredicted RBP30.47■■■□□ 2.47
CHKB-208ENST00000479003 KRT26Q7Z3Y9 468 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 AMNQ9BXJ7 453 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 NDST4Q9H3R1 872 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 HNRNPH3P31942 346 aaKnown RBP30.47■■■□□ 2.47
CHKB-208ENST00000479003 PICK1Q9NRD5 415 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 SIK3Q9Y2K2 1263 aa30.47■■■□□ 2.47
CHKB-208ENST00000479003 MAP2K7O14733 419 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 IPO7O95373 1038 aaKnown RBP30.46■■■□□ 2.47
CHKB-208ENST00000479003 SPP2Q13103 211 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 SAMD1Q6SPF0 538 aaPredicted RBP30.46■■■□□ 2.47
CHKB-208ENST00000479003 FBXO11Q86XK2 927 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 PSTPIP2Q9H939 334 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 TFR2Q9UP52 801 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 ECM1Q16610 540 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 PAPD7Q5XG87 772 aaKnown RBP30.46■■■□□ 2.47
CHKB-208ENST00000479003 CHURC1Q8WUH1 139 aa30.46■■■□□ 2.47
CHKB-208ENST00000479003 NAP1L4Q99733 375 aaKnown RBP30.46■■■□□ 2.47
CHKB-208ENST00000479003 USP2O75604 605 aaPredicted RBP30.45■■■□□ 2.47
CHKB-208ENST00000479003 IDEP14735 1019 aa30.45■■■□□ 2.47
CHKB-208ENST00000479003 SMC1AQ14683 1233 aaKnown RBP30.45■■■□□ 2.47
CHKB-208ENST00000479003 BEND6Q5SZJ8 279 aaPredicted RBP30.45■■■□□ 2.47
CHKB-208ENST00000479003 HYIQ5T013 277 aa30.45■■■□□ 2.47
CHKB-208ENST00000479003 NCAPH2Q6IBW4 605 aa30.45■■■□□ 2.47
CHKB-208ENST00000479003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.45■■■□□ 2.47
CHKB-208ENST00000479003 SMCHD1A6NHR9 2005 aa30.45■■■□□ 2.46
CHKB-208ENST00000479003 TUBBP07437 444 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 LRRC55Q6ZSA7 311 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 LPAR1Q92633 364 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 FEM1BQ9UK73 627 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 PLAGL2Q9UPG8 496 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 PHIPQ8WWQ0 1821 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 RCCD1A6NED2 376 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 PLA2G6O60733 806 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 ERLIN1O75477 346 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 DNAJC19Q96DA6 116 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 PURBQ96QR8 312 aaKnown RBP30.44■■■□□ 2.46
CHKB-208ENST00000479003 LACRTQ9GZZ8 138 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 GLT8D2Q9H1C3 349 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 EMILIN3Q9NT22 766 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 ZHX2Q9Y6X8 837 aa30.44■■■□□ 2.46
CHKB-208ENST00000479003 POTECB2RU33 542 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 WDR46O15213 610 aaKnown RBP30.43■■■□□ 2.46
CHKB-208ENST00000479003 ATP1A1P05023 1023 aaKnown RBP30.43■■■□□ 2.46
CHKB-208ENST00000479003 WDR18Q9BV38 432 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 PCDHA12Q9UN75 941 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 KDM3AQ9Y4C1 1321 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L15C9J2P7 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L13C9JLJ4 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L11C9JVI0 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L18D6R9N7 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L22D6RA61 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L17D6RBQ6 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L19D6RCP7 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L20D6RJB6 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 RHOXF2BP0C7M4 288 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L24Q0WX57 530 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 USP17L6PQ6QN14 398 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 FAM160B2Q86V87 743 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 ZNF280CQ8ND82 737 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 TSG101Q99816 390 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 RHOXF2Q9BQY4 288 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 RANBP17Q9H2T7 1088 aaKnown RBP30.43■■■□□ 2.46
CHKB-208ENST00000479003 TAF1DQ9H5J8 278 aaPredicted RBP30.43■■■□□ 2.46
CHKB-208ENST00000479003 SAR1BQ9Y6B6 198 aa30.43■■■□□ 2.46
CHKB-208ENST00000479003 SCN4AP35499 1836 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 ENC1O14682 589 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 VCAM1P19320 739 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 OAS2P29728 719 aaKnown RBP30.42■■■□□ 2.46
CHKB-208ENST00000479003 VAV2P52735 878 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 BACE1P56817 501 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 EAPPQ56P03 285 aaPredicted RBP30.42■■■□□ 2.46
CHKB-208ENST00000479003 CCDC174Q6PII3 467 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 NOA1Q8NC60 698 aaKnown RBP30.42■■■□□ 2.46
CHKB-208ENST00000479003 NT5C3AQ9H0P0 336 aa30.42■■■□□ 2.46
CHKB-208ENST00000479003 COASYQ13057 564 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 NOL9Q5SY16 702 aaKnown RBP30.41■■■□□ 2.46
CHKB-208ENST00000479003 HDAC6Q9UBN7 1215 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 MARCH6O60337 910 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.41■■■□□ 2.46
CHKB-208ENST00000479003 MSL3Q8N5Y2 521 aaKnown RBP30.41■■■□□ 2.46
CHKB-208ENST00000479003 ZC3H15Q8WU90 426 aaKnown RBP30.41■■■□□ 2.46
CHKB-208ENST00000479003 CCDC42Q96M95 316 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 TSGA10Q9BZW7 698 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 AS3MTQ9HBK9 375 aa30.41■■■□□ 2.46
CHKB-208ENST00000479003 OTOFQ9HC10 1997 aa30.4■■■□□ 2.46
CHKB-208ENST00000479003 OPLAHO14841 1288 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms