RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MTG1Q9BT17 334 aaPredicted RBP30.34■■■□□ 2.45
CCM2-211ENST00000478582 SEZ6LQ9BYH1 1024 aa30.34■■■□□ 2.45
CCM2-211ENST00000478582 JPH1Q9HDC5 661 aaPredicted RBP30.34■■■□□ 2.45
CCM2-211ENST00000478582 SLC9A2Q9UBY0 812 aa30.34■■■□□ 2.45
CCM2-211ENST00000478582 NOP56O00567 594 aaKnown RBP30.33■■■□□ 2.45
CCM2-211ENST00000478582 ITGB8P26012 769 aa30.33■■■□□ 2.45
CCM2-211ENST00000478582 ITGA7Q13683 1181 aa30.33■■■□□ 2.45
CCM2-211ENST00000478582 LRIT3Q3SXY7 679 aa30.33■■■□□ 2.45
CCM2-211ENST00000478582 SLC5A5Q92911 643 aa30.33■■■□□ 2.45
CCM2-211ENST00000478582 SLC37A4O43826 429 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 HSP90AA1P07900 732 aaKnown RBP30.32■■■□□ 2.44
CCM2-211ENST00000478582 RAG1P15918 1043 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 TRAPPC10P48553 1259 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 FAM126BQ8IXS8 530 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 ETNPPLQ8TBG4 499 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 SEPT1Q8WYJ6 367 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 RIT2Q99578 217 aa30.32■■■□□ 2.44
CCM2-211ENST00000478582 GRIN2DO15399 1336 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 SOX1O00570 391 aaPredicted RBP30.31■■■□□ 2.44
CCM2-211ENST00000478582 TLR3O15455 904 aaKnown RBP30.31■■■□□ 2.44
CCM2-211ENST00000478582 SYT1P21579 422 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 MCTP1Q6DN14 999 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 KCNMB3Q9NPA1 279 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 TBX21Q9UL17 535 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 TELO2Q9Y4R8 837 aa30.31■■■□□ 2.44
CCM2-211ENST00000478582 GSTTP1A0A1W2PQM5 241 aa30.3■■■□□ 2.44
CCM2-211ENST00000478582 TBX3O15119 743 aa30.3■■■□□ 2.44
CCM2-211ENST00000478582 KAT2BQ92831 832 aa30.3■■■□□ 2.44
CCM2-211ENST00000478582 FAM20AQ96MK3 541 aa30.3■■■□□ 2.44
CCM2-211ENST00000478582 DOCK5Q9H7D0 1870 aa30.29■■■□□ 2.44
CCM2-211ENST00000478582 ATG7O95352 703 aa30.29■■■□□ 2.44
CCM2-211ENST00000478582 CD4P01730 458 aa30.29■■■□□ 2.44
CCM2-211ENST00000478582 PSMC6P62333 389 aa30.29■■■□□ 2.44
CCM2-211ENST00000478582 ORC2Q13416 577 aaPredicted RBP30.29■■■□□ 2.44
CCM2-211ENST00000478582 C16orf70Q9BSU1 422 aa30.29■■■□□ 2.44
CCM2-211ENST00000478582 NOL7Q9UMY1 257 aaKnown RBP30.29■■■□□ 2.44
CCM2-211ENST00000478582 WNT7AO00755 349 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 PSMD10O75832 226 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 F2P00734 622 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 TIMP1P01033 207 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 LGALS2P05162 132 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 ACTR2P61160 394 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 SP4Q02446 784 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 BECN1Q14457 450 aa30.28■■■□□ 2.44
CCM2-211ENST00000478582 ZNF746Q6NUN9 644 aaPredicted RBP30.28■■■□□ 2.44
CCM2-211ENST00000478582 HAS3O00219 553 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 CCNE2O96020 404 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 PDIA4P13667 645 aaKnown RBP30.27■■■□□ 2.44
CCM2-211ENST00000478582 TCF7P36402 384 aaPredicted RBP30.27■■■□□ 2.44
CCM2-211ENST00000478582 KRT76Q01546 638 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 LRCH2Q5VUJ6 765 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 LRCH3Q96II8 777 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 UIMC1Q96RL1 719 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 KATNAL1Q9BW62 490 aa30.27■■■□□ 2.44
CCM2-211ENST00000478582 VPS37CA5D8V6 355 aaPredicted RBP30.26■■■□□ 2.43
CCM2-211ENST00000478582 DDX39AO00148 427 aaKnown RBP30.26■■■□□ 2.43
CCM2-211ENST00000478582 GAS7O60861 476 aa30.26■■■□□ 2.43
CCM2-211ENST00000478582 POTEDQ86YR6 584 aa30.26■■■□□ 2.43
CCM2-211ENST00000478582 HAS1Q92839 578 aa30.26■■■□□ 2.43
CCM2-211ENST00000478582 TEKT3Q9BXF9 490 aa30.26■■■□□ 2.43
CCM2-211ENST00000478582 LGR5O75473 907 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 ZNF286BP0CG31 522 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 TOB1P50616 345 aaPredicted RBP30.25■■■□□ 2.43
CCM2-211ENST00000478582 SHHQ15465 462 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 RILPL1Q5EBL4 403 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 TTC38Q5R3I4 469 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 B3GNT9Q6UX72 402 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 ABHD15Q6UXT9 468 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 BRAPQ7Z569 592 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 SMAP1Q8IYB5 467 aaPredicted RBP30.25■■■□□ 2.43
CCM2-211ENST00000478582 SLFN12Q8IYM2 578 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 TCEAL9Q9UHQ7 104 aa30.25■■■□□ 2.43
CCM2-211ENST00000478582 SCN10AQ9Y5Y9 1956 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 IGKV6D-21A0A0A0MT36 114 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 H3BRB1 525 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 STX6O43752 255 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 NEMFO60524 1076 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 ATP2B1P20020 1258 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 PSEN2P49810 448 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 FPGSQ05932 587 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 NBPF20Q3BBV1 942 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 NFRKBQ6P4R8 1299 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 GJA10Q969M2 543 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 TUT1Q9H6E5 874 aaKnown RBP30.24■■■□□ 2.43
CCM2-211ENST00000478582 MTMR6Q9Y217 621 aa30.24■■■□□ 2.43
CCM2-211ENST00000478582 EMSYQ7Z589 1322 aa30.23■■■□□ 2.43
CCM2-211ENST00000478582 BAG4O95429 457 aaKnown RBP30.23■■■□□ 2.43
CCM2-211ENST00000478582 MCM7P33993 719 aa30.23■■■□□ 2.43
CCM2-211ENST00000478582 PTPN11Q06124 597 aaPredicted RBP30.23■■■□□ 2.43
CCM2-211ENST00000478582 MFSD10Q14728 455 aa30.23■■■□□ 2.43
CCM2-211ENST00000478582 MFSD5Q6N075 450 aa30.23■■■□□ 2.43
CCM2-211ENST00000478582 MTMR9Q96QG7 549 aa30.23■■■□□ 2.43
CCM2-211ENST00000478582 B4GALT4O60513 344 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 SUPT20HL2P0C7V6 817 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 ZNF174Q15697 407 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 CALCRLQ16602 461 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 C9orf50Q5SZB4 431 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 UTP14CQ5TAP6 766 aaKnown RBP30.22■■■□□ 2.43
CCM2-211ENST00000478582 GPR153Q6NV75 609 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 SESTD1Q86VW0 696 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms