RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 FBXO18Q8NFZ0 1043 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 KAT2BQ92831 832 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 TNFRSF25Q93038 417 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 LENG9Q96B70 501 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 KATNAL1Q9BW62 490 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 PRKAG2Q9UGJ0 569 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 DDX25Q9UHL0 483 aaKnown RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 NFASCO94856 1347 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 H3BQV1 296 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
BRCA1-215ENST00000478531 CHMP2AO43633 222 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 GAS7O60861 476 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 F2P00734 622 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 CLTBP09497 229 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 HOXD8P13378 290 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-215ENST00000478531 MARK3P27448 753 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 PSEN2P49810 448 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 ACTR2P61160 394 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 LRCH2Q5VUJ6 765 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 SH3RF1Q7Z6J0 888 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 C7orf31Q8N865 590 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 GLG1Q92896 1179 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 TRPV6Q9H1D0 765 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 PDLIM7Q9NR12 457 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 TRMT13Q9NUP7 481 aaKnown RBP7.81□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF215Q9UL58 517 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-215ENST00000478531 SAMM50Q9Y512 469 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 TANC1Q9C0D5 1861 aa7.81□□□□□ -1.16
BRCA1-215ENST00000478531 KIF28PB7ZC32 967 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 H3BRB1 525 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 BACH1O14867 736 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 B4GALT4O60513 344 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 HSP90AA1P07900 732 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 CDK7P50613 346 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 FAAP100Q0VG06 881 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 CUL4AQ13619 759 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 Q4G0T1 1027 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 NFRKBQ6P4R8 1299 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 ANKRD33Q7Z3H0 272 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 NOSTRINQ8IVI9 506 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 SEPT1Q8WYJ6 367 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 C16orf70Q9BSU1 422 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 AZI2Q9H6S1 392 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TMEM39AQ9NV64 488 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 SCN5AQ14524 2016 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 MYH15Q9Y2K3 1946 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 CYP3A7-CYP3A51PA0A087WV96 503 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 VPS37CA5D8V6 355 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TRIM43BA6NCK2 446 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 WNT7AO00755 349 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 DHX15O43143 795 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 MARCH6O60337 910 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 CCNE2O96020 404 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 GCFC2P16383 781 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 CYP3A7P24462 503 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 PRPF38BQ5VTL8 546 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 LARP1BQ659C4 914 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 MOXD1Q6UVY6 613 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TRMT1LQ7Z2T5 733 aaKnown RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 SLC43A3Q8NBI5 491 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 ETNPPLQ8TBG4 499 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TRIM43Q96BQ3 446 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TOX2Q96NM4 488 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 FOXP1Q9H334 677 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-215ENST00000478531 TBC1D22BQ9NU19 505 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 HDAC6Q9UBN7 1215 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 EVPLQ92817 2033 aa7.8□□□□□ -1.16
BRCA1-215ENST00000478531 SUPT20HL2P0C7V6 817 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SMIM10L2AP0DMW4 78 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SMIM10L2BP0DMW5 78 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 CYP2C9P11712 490 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 RAG1P15918 1043 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 MCM7P33993 719 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 KRT76Q01546 638 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 NBR1Q14596 966 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 PTGISQ16647 500 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 PPP4R3AQ6IN85 833 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 GDF6Q6KF10 455 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SPRYD3Q8NCJ5 442 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SLC5A5Q92911 643 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 SNX21Q969T3 373 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 NAP1L4Q99733 375 aaKnown RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 LBHD1Q9BQE6 289 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-215ENST00000478531 TEKT3Q9BXF9 490 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 EMSYQ7Z589 1322 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 CDH23Q9H251 3354 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 LOXHD1Q8IVV2 1947 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 HAS3O00219 553 aa7.79□□□□□ -1.16
BRCA1-215ENST00000478531 NEMFO60524 1076 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms