RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 LUC7L2Q9Y383 392 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 PHLPP2Q6ZVD8 1323 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 MYMKA6NI61 221 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 POLRMTO00411 1230 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 GNA11P29992 359 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 PEX19P40855 299 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 CDC42EP5Q6NZY7 148 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 CNGA4Q8IV77 575 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 KRT222Q8N1A0 295 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 CNOT6LQ96LI5 555 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 ZMYND12Q9H0C1 365 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 ZNF287Q9HBT7 754 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 RRP15Q9Y3B9 282 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 EPHB6O15197 1021 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 TMEM127O75204 238 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 SASH3O75995 380 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 INMTO95050 263 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 PNMA6AP0CW24 399 aaPredicted RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 HOXA13P31271 388 aaPredicted RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 PBX1P40424 430 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 MATR3P43243 847 aaKnown RBP eCLIP6.69□□□□□ -1.342e-6■■□□□ 13.4
SH3D19-207ENST00000478503 ADCY7P51828 1080 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 PPARDQ03181 441 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 STIM1Q13586 685 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 Q3C1V9 767 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 ARL6IP4Q66PJ3 421 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 CCDC84Q86UT8 332 aaPredicted RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 RPUSD2Q8IZ73 545 aaKnown RBP6.69□□□□□ -1.34
SH3D19-207ENST00000478503 MB21D1Q8N884 522 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 FGFBP2Q9BYJ0 223 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 ACBD3Q9H3P7 528 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 JMJD4Q9H9V9 463 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 RMND1Q9NWS8 449 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 MRFAP1Q9Y605 127 aa6.69□□□□□ -1.34
SH3D19-207ENST00000478503 RCCD1A6NED2 376 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 DCAF8L1A6NGE4 600 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 DDTLA6NHG4 134 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 E9PMD0 336 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 MAP3K9P80192 1104 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CCDC15Q0P6D6 951 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 ZNF449Q6P9G9 518 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 KRT25Q7Z3Z0 450 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 KIAA1328Q86T90 577 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 KIAA0895Q8NCT3 520 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CALML4Q96GE6 196 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 PANX2Q96RD6 677 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 TSPYL1Q9H0U9 437 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 NLRC4Q9NPP4 1024 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 SMARCAL1Q9NZC9 954 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 EPN1Q9Y6I3 576 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 DOCK2Q92608 1830 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 ZNF185O15231 689 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 BBOX1O75936 387 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CSPG5O95196 566 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 IL1R1P14778 569 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 PIK3CAP42336 1068 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CHMP4BP1P59074 171 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CYP4A11Q02928 519 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 GRB10Q13322 594 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 BIRC3Q13489 604 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 FXNQ16595 210 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CCDC122Q5T0U0 273 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 FCHSD1Q86WN1 690 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 COL23A1Q86Y22 540 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 NOA1Q8NC60 698 aaKnown RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 KBTBD4Q9NVX7 518 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CPSF2Q9P2I0 782 aaKnown RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 LIMA1Q9UHB6 759 aaKnown RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 REXO2Q9Y3B8 237 aaKnown RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 FHOD1Q9Y613 1164 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 BCORQ6W2J9 1755 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 EDIL3O43854 480 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 APBA3O96018 575 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 FAM163BP0C2L3 166 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 H2AFXP16104 143 aaPredicted RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CXCR5P32302 372 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 AP1ARQ63HQ0 302 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 TTI2Q6NXR4 508 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 SV2BQ7L1I2 683 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 SNED1Q8TER0 1413 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 TDRD3Q9H7E2 651 aaKnown RBP6.68□□□□□ -1.34
SH3D19-207ENST00000478503 SLC45A1Q9Y2W3 748 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 TIAM2Q8IVF5 1701 aa6.68□□□□□ -1.34
SH3D19-207ENST00000478503 CLRN2A0PK11 232 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 CTAGE9A4FU28 777 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 H7C1D1 291 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 NDUFA10O95299 355 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 OATP04181 439 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 SLC1A4P43007 532 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 MKRN4PQ13434 485 aaPredicted RBP6.67□□□□□ -1.34
SH3D19-207ENST00000478503 CRY2Q49AN0 593 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 ZC3H12AQ5D1E8 599 aaKnown RBP6.67□□□□□ -1.34
SH3D19-207ENST00000478503 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 TMC4Q7Z404 712 aa6.67□□□□□ -1.34
SH3D19-207ENST00000478503 GSPT2Q8IYD1 628 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms