RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 STK17AQ9UEE5 414 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
U2AF1-210ENST00000478282 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 ERCC3P19447 782 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 HSD17B3P37058 310 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 GRB10Q13322 594 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
U2AF1-210ENST00000478282 NOL4O94818 638 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
U2AF1-210ENST00000478282 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 HLTFQ14527 1009 aaKnown RBP eCLIP16.33■□□□□ 0.2
U2AF1-210ENST00000478282 SLC18A3Q16572 532 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 TEX2Q8IWB9 1127 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 TSG101Q99816 390 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 GMNCA6NCL1 334 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 H0YGN5 161 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 ECHS1P30084 290 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 MMP14P50281 582 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.2
U2AF1-210ENST00000478282 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 CENPHQ9H3R5 247 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 NFS1Q9Y697 457 aa16.33■□□□□ 0.2
U2AF1-210ENST00000478282 CES2O00748 559 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 CUL1Q13616 776 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 FOXR2Q6PJQ5 311 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
U2AF1-210ENST00000478282 HOXA7P31268 230 aaPredicted RBP16.32■□□□□ 0.2
U2AF1-210ENST00000478282 NAPAP54920 295 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 TBC1D5Q92609 795 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 RIC8AQ9NPQ8 531 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 DDX20Q9UHI6 824 aaKnown RBP16.32■□□□□ 0.2
U2AF1-210ENST00000478282 GOLGA6L7A0A1B0GV03 622 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 TRAPPC3O43617 180 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 CDR1P51861 262 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 BIRC3Q13489 604 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 NEDD9Q14511 834 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 UAP1Q16222 522 aaPredicted RBP16.32■□□□□ 0.2
U2AF1-210ENST00000478282 TAF4BQ92750 862 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 LRRC45Q96CN5 670 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 CCDC114Q96M63 670 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
U2AF1-210ENST00000478282 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
U2AF1-210ENST00000478282 PALM3A6NDB9 673 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-210ENST00000478282 C21orf2O43822 256 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 USP17L8P0C7I0 530 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 NT5C2P49902 561 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 ZNF844Q08AG5 666 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 MCM8Q9UJA3 840 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 COL4A3BPQ9Y5P4 624 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 A0A087X0T9 212 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 FAM228BP0C875 321 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
U2AF1-210ENST00000478282 ORC2Q13416 577 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-210ENST00000478282 GIMAP7Q8NHV1 300 aa16.31■□□□□ 0.2
U2AF1-210ENST00000478282 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-210ENST00000478282 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
U2AF1-210ENST00000478282 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 PACSIN1Q9BY11 444 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 USP17L3A6NCW0 530 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 USP17L4A6NCW7 530 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 CHRM1P11229 460 aaPredicted RBP16.3■□□□□ 0.2
U2AF1-210ENST00000478282 CTNNA1P35221 906 aaKnown RBP16.3■□□□□ 0.2
U2AF1-210ENST00000478282 TXKP42681 527 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 PSMD2Q13200 908 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 LRRC41Q15345 812 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 RPS6KA1Q15418 735 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 USP17L1Q7RTZ2 530 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 GLIS3Q8NEA6 775 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
U2AF1-210ENST00000478282 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 ATAD5Q96QE3 1844 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
U2AF1-210ENST00000478282 KCNK3O14649 394 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 ZCWPW2Q504Y3 356 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 WLSQ5T9L3 541 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 FBXO33Q7Z6M2 555 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 TBCKQ8TEA7 893 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
U2AF1-210ENST00000478282 GNA11P29992 359 aa16.29■□□□□ 0.2
U2AF1-210ENST00000478282 FKBP3Q00688 224 aaKnown RBP16.29■□□□□ 0.2
U2AF1-210ENST00000478282 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
U2AF1-210ENST00000478282 QPCTQ16769 361 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms