RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 DAAM2Q86T65 1068 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 RSPH3Q86UC2 560 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZNF483Q8TF39 744 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 TAF4BQ92750 862 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZBTB10Q96DT7 871 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 PDLIM2Q96JY6 352 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 FGD4Q96M96 766 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 GUCD1Q96NT3 240 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 GSDMAQ96QA5 445 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 SEC62Q99442 399 aaKnown RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 NACA2Q9H009 215 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZHX3Q9H4I2 956 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 MKNK2Q9HBH9 465 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 PRDM5Q9NQX1 630 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 MTMR4Q9NYA4 1195 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 SEPT10Q9P0V9 454 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZMAT5Q9UDW3 170 aaKnown RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 CTNNA3Q9UI47 895 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 LZTS1Q9Y250 596 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 PCDHB15Q9Y5E8 787 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 CHD9Q3L8U1 2897 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TTC41PQ6P2S7 1318 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SYNGAP1Q96PV0 1343 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SALL3Q9BXA9 1300 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 GOLGA6L10A0A0M3HER8 536 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 A0A1W2PQ45 241 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 A0A1W2PQY0 241 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 MYADML2A6NDP7 307 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 GOLGA6L9A6NEM1 432 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 OPA1O60313 960 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 KDM1AO60341 852 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SNAI1O95863 264 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 MMEP08473 750 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 AKR1A1P14550 325 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 GNAT2P19087 354 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 CCNCP24863 283 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 U2AF2P26368 475 aaKnown RBP eCLIP6.59□□□□□ -1.351e-15■□□□□ 8.6
TRA2B-211ENST00000477939 TLE2Q04725 743 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SHHQ15465 462 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 FAM109BQ6ICB4 259 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 RASGRP2Q7LDG7 609 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SPATA21Q7Z572 469 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 RNF180Q86T96 592 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TTC30AQ86WT1 665 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 IFNL3Q8IZI9 196 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 CPXCR1Q8N123 301 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 PRPF38AQ8NAV1 312 aaKnown RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 GMCL1P1Q8NEA9 526 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TEKT4Q8WW24 435 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 PIBF1Q8WXW3 757 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 BADQ92934 168 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 KIFC2Q96AC6 838 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TRIM11Q96F44 468 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 NAF1Q96HR8 494 aaKnown RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 DHRS1Q96LJ7 313 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TTC14Q96N46 770 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 SLC38A10Q9HBR0 1119 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 RAVER2Q9HCJ3 691 aaKnown RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 GPCPD1Q9NPB8 672 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 BATF3Q9NR55 127 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 PSD3Q9NYI0 1048 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 TMEM63CQ9P1W3 806 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 CNPY2Q9Y2B0 182 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 RRP15Q9Y3B9 282 aaKnown RBP6.59□□□□□ -1.35
TRA2B-211ENST00000477939 REV3LO60673 3130 aa6.59□□□□□ -1.35
TRA2B-211ENST00000477939 DLL1O00548 723 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ERC2O15083 957 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 PQBP1O60828 265 aaKnown RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ZBED4O75132 1171 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 TTLL1O95922 423 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CLTBP09497 229 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 MX1P20591 662 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ELF1P32519 619 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 EPHB4P54760 987 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 PPARAQ07869 468 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 BIRC3Q13489 604 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 SART3Q15020 963 aaKnown RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 MUM1Q2TAK8 710 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 PREPLQ4J6C6 727 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CCDC122Q5T0U0 273 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CCDC129Q6ZRS4 1044 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF467Q7Z7K2 595 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 SAMD14Q8IZD0 417 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF444Q8N0Y2 327 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 TRIML1Q8N9V2 468 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ATP11CQ8NB49 1132 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 FBXO18Q8NFZ0 1043 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 NEDD1Q8NHV4 660 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 KIF18AQ8NI77 898 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 FRS2Q8WU20 508 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms