RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 COL19A1Q14993 1142 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 SMAD2Q15796 467 aaKnown RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 HOMER1Q86YM7 354 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 WDR11Q9BZH6 1224 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 RIOX1Q9H6W3 641 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 SMC3Q9UQE7 1217 aa13.26□□□□□ -0.29
LSM2-212ENST00000477182 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
LSM2-212ENST00000477182 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 STK36Q9NRP7 1315 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 M0R296 226 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 SELPP16109 830 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 IKBKEQ14164 716 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 PTGISQ16647 500 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 TRIM67Q6ZTA4 783 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 OR6J1Q8NGC5 347 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 RRP36Q96EU6 259 aaKnown RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 PIGSQ96S52 555 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 RNF26Q9BY78 433 aaPredicted RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
LSM2-212ENST00000477182 CLDND1Q9NY35 253 aa13.25□□□□□ -0.29
LSM2-212ENST00000477182 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 NKRFO15226 690 aaKnown RBP eCLIP13.24□□□□□ -0.29
LSM2-212ENST00000477182 CXCL10P02778 98 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 GJB2P29033 226 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 CDC37Q16543 378 aaPredicted RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 ATOH1Q92858 354 aaPredicted RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
LSM2-212ENST00000477182 ADD3Q9UEY8 706 aaKnown RBP13.24□□□□□ -0.29
LSM2-212ENST00000477182 H3BNC9 293 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 DEXIO95424 95 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 FOSBP53539 338 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 QRICH1Q2TAL8 776 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 EPC2Q52LR7 807 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 FAM184AQ8NB25 1140 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 AIFM3Q96NN9 605 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
LSM2-212ENST00000477182 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 SEC63Q9UGP8 760 aaKnown RBP13.23□□□□□ -0.29
LSM2-212ENST00000477182 CACNA1HO95180 2353 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 KMT2EQ8IZD2 1858 aa13.23□□□□□ -0.29
LSM2-212ENST00000477182 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
LSM2-212ENST00000477182 A6NJR5 290 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 ZBTB5O15062 677 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
LSM2-212ENST00000477182 ALAS1P13196 640 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 SCG2P13521 617 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 RBL2Q08999 1139 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 GPM6BQ13491 265 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 GPNMBQ14956 572 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
LSM2-212ENST00000477182 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 HEATR3Q7Z4Q2 680 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 GPKOWQ92917 476 aaPredicted RBP eCLIP13.22□□□□□ -0.29
LSM2-212ENST00000477182 ALG1Q9BT22 464 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
LSM2-212ENST00000477182 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
LSM2-212ENST00000477182 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 STXBP3O00186 592 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 MBTPS2O43462 519 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 NBNO60934 754 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 AMHP03971 560 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
LSM2-212ENST00000477182 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
LSM2-212ENST00000477182 WASF1Q92558 559 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 MICAL3Q7RTP6 2002 aa13.21□□□□□ -0.29
LSM2-212ENST00000477182 CKBP12277 381 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 LTBRP36941 435 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 NUBP1P53384 320 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 ZXDAP98168 799 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 SMAD4Q13485 552 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms