RNA–Protein interactions for RNA: ENST00000477049.1

SETX-205, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 4,067 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-205ENST00000477049 NRXN2Q9P2S2 1712 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 KIAA1024Q9UPX6 916 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 CETN3O15182 167 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 HNRNPH3P31942 346 aaKnown RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 LRRC63Q05C16 580 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 COL23A1Q86Y22 540 aaPredicted RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 NELFCDQ8IXH7 590 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 EHMT1Q9H9B1 1298 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 PCDHA1Q9Y5I3 950 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 C10orf71Q711Q0 1435 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 NDUFAB1O14561 156 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 NPR1P16066 1061 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 RPL13P26373 211 aaKnown RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 KIF11P52732 1056 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 PPFIA1Q13136 1202 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 CDC37Q16543 378 aaPredicted RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 HERC4Q5GLZ8 1057 aaPredicted RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 HS2ST1Q7LGA3 356 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 IFT20Q8IY31 132 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 CTNNBL1Q8WYA6 563 aaPredicted RBP8.03□□□□□ -1.12
SETX-205ENST00000477049 MED4Q9NPJ6 270 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 PCDHA2Q9Y5H9 948 aa8.03□□□□□ -1.12
SETX-205ENST00000477049 A6NNZ2 444 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 MED24O75448 989 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ZMYND10O75800 440 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 MOCS3O95396 460 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 SLC1A4P43007 532 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 SEPT2Q15019 361 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 TUBB8Q3ZCM7 444 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 CFAP221Q4G0U5 840 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ANO3Q9BYT9 981 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 QTRT2Q9H974 415 aaKnown RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 NLRC4Q9NPP4 1024 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 PCDHA13Q9Y5I0 950 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.02□□□□□ -1.13
SETX-205ENST00000477049 COL11A2P13942 1736 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 LRRIQ3A6PVS8 624 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 MEIS2O14770 477 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 GDF11O95390 407 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 PLA2G4BP0C869 781 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 GTF2A1P52655 376 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 USP14P54578 494 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 JAG1P78504 1218 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 PSMD2Q13200 908 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 DCAF17Q5H9S7 520 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 HYIQ5T013 277 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 HINFPQ9BQA5 517 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 EHD4Q9H223 541 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 KCNMB3Q9NPA1 279 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ATP2C2O75185 946 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 POTEIP0CG38 1075 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 GCFC2P16383 781 aaKnown RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 CYP11B2P19099 503 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 HMGB2P26583 209 aaKnown RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 TRAF1Q13077 416 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 CASP8Q14790 479 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 CERKLQ49MI3 558 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 SLFN13Q68D06 897 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 MSL1Q68DK7 614 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 GPBP1Q86WP2 473 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ANKRD13CQ8N6S4 541 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 FAM71BQ8TC56 605 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ZDHHC15Q96MV8 337 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 PLVAPQ9BX97 442 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 SH2D4AQ9H788 454 aa8.02□□□□□ -1.13
SETX-205ENST00000477049 ZNF219Q9P2Y4 722 aaPredicted RBP8.02□□□□□ -1.13
SETX-205ENST00000477049 NOL4O94818 638 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 KRT13P13646 458 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 HSPA1LP34931 641 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 PSMC6P62333 389 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 GFPT1Q06210 699 aaPredicted RBP8.01□□□□□ -1.13
SETX-205ENST00000477049 C2orf54Q08AI8 447 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 ARSHQ5FYA8 562 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 WDR93Q6P2C0 686 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 PDXDC1Q6P996 788 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 GSPT2Q8IYD1 628 aaKnown RBP8.01□□□□□ -1.13
SETX-205ENST00000477049 COG1Q8WTW3 980 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 SCFD1Q8WVM8 642 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 TSKSQ9UJT2 592 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 SAMM50Q9Y512 469 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 COL4A3BPQ9Y5P4 624 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 ABCB11O95342 1321 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 MEIS1O00470 390 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 TLR2O60603 784 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 MMP10P09238 476 aa8.01□□□□□ -1.13
SETX-205ENST00000477049 TCP1P17987 556 aaKnown RBP8.01□□□□□ -1.13
SETX-205ENST00000477049 CASP5P51878 434 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms