RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 MYH3P11055 1940 aa9.07□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CUTAO60888 179 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LDHBP07195 334 aaKnown RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SP100P23497 879 aaPredicted RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCNCP24863 283 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 HMGB2P26583 209 aaKnown RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GGCXP38435 758 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SCTRP47872 440 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CEBPZQ03701 1054 aaKnown RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LONRF1Q17RB8 773 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LACTB2Q53H82 288 aaPredicted RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCDC122Q5T0U0 273 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CFAP58Q5T655 872 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ARMCX5Q6P1M9 558 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ZNF365Q70YC5 407 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 AGAP11Q8TF27 550 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GIPC2Q8TF65 315 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NCSTNQ92542 709 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GPATCH3Q96I76 525 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MOV10L1Q9BXT6 1211 aaKnown RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 NYXQ9GZU5 481 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TPK1Q9H3S4 243 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GPR108Q9NPR9 543 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MRGBPQ9NV56 204 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TFCP2L1Q9NZI6 479 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RTL9Q8NET4 1388 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LAMB2P55268 1798 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 A0A1W2PQ67 120 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 AGPSO00116 658 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SKIP12755 728 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 COX10Q12887 443 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ANKRD20A2Q5SQ80 823 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ANKRD20A1Q5TYW2 823 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ANKRD20A3Q5VUR7 823 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LDHAL6AQ6ZMR3 332 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 DHX58Q96C10 678 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ERP27Q96DN0 273 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CAMKK2Q96RR4 588 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RMND1Q9NWS8 449 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SLC4A7Q9Y6M7 1214 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TUBGCP6Q96RT7 1819 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RIC1Q4ADV7 1423 aa9.06□□□□□ -0.96
CNTNAP3B-205ENST00000476961 LRP5O75197 1615 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GLRX3O76003 335 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ALADP13716 330 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PORP16435 677 aaPredicted RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ZNF131P52739 623 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PDE1BQ01064 536 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 EN1Q05925 392 aaPredicted RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 BYSLQ13895 437 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 EZH2Q15910 746 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CHCHD4Q8N4Q1 142 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GSDMBQ8TAX9 411 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 DQX1Q8TE96 717 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 WDR24Q96S15 920 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 HNRNPABQ99729 332 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 DBNDD2Q9BQY9 259 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 EPN3Q9H201 632 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CHMP2BQ9UQN3 213 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PCDHB2Q9Y5E7 798 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CARMIL3Q8ND23 1372 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 A0A0J9YVX5 310 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 VWA3AA6NCI4 1184 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 EIF4E1BA6NMX2 242 aaKnown RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FIBPO43427 364 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 HIP1RO75146 1068 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SFPQP23246 707 aaKnown RBP eCLIP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TM4SF1P30408 202 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 GSTT1P30711 240 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TIMM10P62072 90 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 FOXB2Q5VYV0 432 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 OR52E8Q6IFG1 317 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 WDR93Q6P2C0 686 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TPTE2Q6XPS3 522 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 COL23A1Q86Y22 540 aaPredicted RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SCUBE1Q8IWY4 988 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SPERTQ8NA61 448 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RILPL2Q969X0 211 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 TCF12Q99081 682 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 MAP3K14Q99558 947 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 IER2Q9BTL4 223 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 DNAJC25Q9H1X3 360 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 PARVGQ9HBI0 331 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 ZNF609O15014 1411 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 COL4A1P02462 1669 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RGPD3A6NKT7 1758 aaPredicted RBP9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 RGPD4Q7Z3J3 1758 aa9.05□□□□□ -0.96
CNTNAP3B-205ENST00000476961 A0A0B4J203 849 aa9.04□□□□□ -0.96
CNTNAP3B-205ENST00000476961 SPTLC1O15269 473 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms