RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 LGR5O75473 907 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 CXCL10P02778 98 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 CA3P07451 260 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 KCNA2P16389 499 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 TRIM50Q86XT4 487 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 ANO3Q9BYT9 981 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.89
ABCB1-204ENST00000476862 C6orf50Q9HD87 102 aa20.58■□□□□ 0.89
ABCB1-204ENST00000476862 EPB41L2O43491 1005 aaKnown RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 GTPBP6O43824 516 aaPredicted RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 SCG2P13521 617 aa20.57■□□□□ 0.88
ABCB1-204ENST00000476862 WDR5P61964 334 aaKnown RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 PFKFB3Q16875 520 aaPredicted RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 TRIM71Q2Q1W2 868 aaKnown RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 JPH1Q9HDC5 661 aaPredicted RBP20.57■□□□□ 0.88
ABCB1-204ENST00000476862 SLC9A2Q9UBY0 812 aa20.57■□□□□ 0.88
ABCB1-204ENST00000476862 MARK3P27448 753 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 GNA11P29992 359 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 FUT2Q10981 343 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 HIC1Q14526 733 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 SEPT8Q92599 483 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 WNT8BQ93098 351 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 PGBD1Q96JS3 809 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 KCNH7Q9NS40 1196 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
ABCB1-204ENST00000476862 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
ABCB1-204ENST00000476862 AMHP03971 560 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 CTSHP09668 335 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 PPFIA1Q13136 1202 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 CCDC85BQ15834 202 aaPredicted RBP20.55■□□□□ 0.88
ABCB1-204ENST00000476862 JAKMIP3Q5VZ66 844 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 TYW1BQ6NUM6 668 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 BICD2Q8TD16 824 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 CYP46A1Q9Y6A2 500 aa20.55■□□□□ 0.88
ABCB1-204ENST00000476862 GSTTP1A0A1W2PQM5 241 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 PRPF3O43395 683 aaKnown RBP20.54■□□□□ 0.88
ABCB1-204ENST00000476862 GPNMBQ14956 572 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 TAF2Q6P1X5 1199 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 RUFY3Q7L099 469 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 MICALL1Q8N3F8 863 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 FBXL16Q8N461 479 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 CCDC148Q8NFR7 591 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 DBF4BQ8NFT6 615 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 LMBR1Q8WVP7 490 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
ABCB1-204ENST00000476862 CERS4Q9HA82 394 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 TMEM260Q9NX78 707 aa20.54■□□□□ 0.88
ABCB1-204ENST00000476862 NFASCO94856 1347 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 RRN3P2A6NIE6 340 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 HOXC8P31273 242 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 SREBF1P36956 1147 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 CPLX2Q6PUV4 134 aaKnown RBP20.53■□□□□ 0.88
ABCB1-204ENST00000476862 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 RAD9AQ99638 391 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 SLC26A6Q9BXS9 759 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 TRPC6Q9Y210 931 aa20.53■□□□□ 0.88
ABCB1-204ENST00000476862 ESYT2A0FGR8 921 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 CPLX1O14810 134 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 RPLP2P05387 115 aaKnown RBP20.52■□□□□ 0.88
ABCB1-204ENST00000476862 ARP10275 920 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 IGBP1P78318 339 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.88
ABCB1-204ENST00000476862 DEFB103AP81534 67 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 GRIK4Q16099 956 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 TRAF7Q6Q0C0 670 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 MYOCDQ8IZQ8 938 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 REXO1Q8N1G1 1221 aaKnown RBP20.52■□□□□ 0.88
ABCB1-204ENST00000476862 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 PHKBQ93100 1093 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 RNF26Q9BY78 433 aaPredicted RBP20.52■□□□□ 0.88
ABCB1-204ENST00000476862 TUBE1Q9UJT0 475 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 TELO2Q9Y4R8 837 aa20.52■□□□□ 0.88
ABCB1-204ENST00000476862 MEIS1O00470 390 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 GJB5O95377 273 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 CLK2P49760 499 aaKnown RBP20.51■□□□□ 0.87
ABCB1-204ENST00000476862 STAT5BP51692 787 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 ACTR2P61160 394 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 TAP1Q03518 808 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 ADGRE1Q14246 886 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 SKIV2LQ15477 1246 aaKnown RBP20.51■□□□□ 0.87
ABCB1-204ENST00000476862 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 FAM160B1Q5W0V3 765 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 NIPA1Q7RTP0 329 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 CYP2W1Q8TAV3 490 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 APBB2Q92870 758 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 ZMYND12Q9H0C1 365 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 AGO4Q9HCK5 861 aaKnown RBP20.51■□□□□ 0.87
ABCB1-204ENST00000476862 INSL6Q9Y581 213 aa20.51■□□□□ 0.87
ABCB1-204ENST00000476862 M0QZ92 97 aa20.5■□□□□ 0.87
ABCB1-204ENST00000476862 DDX39AO00148 427 aaKnown RBP20.5■□□□□ 0.87
ABCB1-204ENST00000476862 BACH1O14867 736 aa20.5■□□□□ 0.87
ABCB1-204ENST00000476862 PDIA3P30101 505 aaKnown RBP20.5■□□□□ 0.87
ABCB1-204ENST00000476862 SSRP1Q08945 709 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms