RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 RNF216Q9NWF9 866 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ARHGAP20Q9P2F6 1191 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ABCB11O95342 1321 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 GCOM1H8Y6P7 765 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 EML1O00423 815 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 TBCAO75347 108 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 POLR2MP0CAP2 368 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 DPEP1P16444 411 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 KIF11P52732 1056 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 APBA1Q02410 837 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 GIT2Q14161 759 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ENOX2Q16206 610 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 PIGOQ8TEQ8 1089 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ZBTB9Q96C00 473 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 CAMKK2Q96RR4 588 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 EIF2AK1Q9BQI3 630 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 FBXO28Q9NVF7 368 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 PLAGL2Q9UPG8 496 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ZNF263O14978 683 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PRPF6O94906 941 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 VIL1P09327 827 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 NR2F2P24468 414 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 HOXA7P31268 230 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 VAV2P52735 878 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 POLR2FP61218 127 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ARID5AQ03989 594 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SPDYE2Q495Y8 402 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 TPH2Q8IWU9 490 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 NIM1KQ8IY84 436 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CAGE1Q8TC20 777 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SECISBP2LQ93073 1101 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CEP63Q96MT8 703 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 GLIS2Q9BZE0 524 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 KCTD10Q9H3F6 313 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 JADE2Q9NQC1 790 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 VAV3Q9UKW4 847 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 RABGAP1Q9Y3P9 1069 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PCDHA13Q9Y5I0 950 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CNTNAP1P78357 1384 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ARFGEF1Q9Y6D6 1849 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SFI1A8K8P3 1242 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CETN3O15182 167 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 USO1O60763 962 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ZRANB2O95218 330 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 GNA14O95837 355 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 MYBP10242 640 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 MMP14P50281 582 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CDK17Q00537 523 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 AMPD2Q01433 879 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 KCNMA1Q12791 1236 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 LRCH2Q5VUJ6 765 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SYT2Q8N9I0 419 aaPredicted RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CHURC1Q8WUH1 139 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 WDR18Q9BV38 432 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 BCAS3Q9H6U6 928 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ANKZF1Q9H8Y5 726 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SAR1BQ9Y6B6 198 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 SLC26A4O43511 780 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 GCNT3O95395 438 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 CIITAP33076 1130 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PDXDC1Q6P996 788 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ANKRD13CQ8N6S4 541 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 NOA1Q8NC60 698 aaKnown RBP9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PNKPQ96T60 521 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 TSGA10Q9BZW7 698 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 MLXIPQ9HAP2 919 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PKD2L1Q9P0L9 805 aa9.86□□□□□ -0.83
CCDC66-216ENST00000476142 PITPNM2Q9BZ72 1349 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 PIK3CDO00329 1044 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 GAS7O60861 476 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 GFPT1Q06210 699 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 TRAF1Q13077 416 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 TRAPPC11Q7Z392 1133 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 BAP1Q92560 729 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 DYDC2Q96IM9 177 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 GMLQ99445 158 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 VCPKMTQ9H867 229 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 IGLV3-22A0A075B6J6 115 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 FRMD3A2A2Y4 597 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 ZBTB39O15060 712 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 SASH3O75995 380 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 MOCS3O95396 460 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 TBC1D8O95759 1140 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 CYP3A4P08684 503 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 HNRNPH3P31942 346 aaKnown RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 NAP1L1P55209 391 aaKnown RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 RAPGEF1Q13905 1077 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 KNOP1Q1ED39 458 aaKnown RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 NBPF9Q3BBW0 867 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 DCAF17Q5H9S7 520 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-216ENST00000476142 SFMBT2Q5VUG0 894 aa9.85□□□□□ -0.83
CCDC66-216ENST00000476142 TCERG1LQ5VWI1 586 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms