RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 STXBP5LQ9Y2K9 1186 aa17.14■□□□□ 0.33
SNX13-207ENST00000475800 ARVCFO00192 962 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 EDIL3O43854 480 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 ITGB8P26012 769 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
SNX13-207ENST00000475800 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 LENG9Q96B70 501 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 GPR20Q99678 358 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 DDX25Q9UHL0 483 aaKnown RBP17.13■□□□□ 0.33
SNX13-207ENST00000475800 WDR81Q562E7 1941 aa17.13■□□□□ 0.33
SNX13-207ENST00000475800 SORBS3O60504 671 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 TDP2O95551 362 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX13-207ENST00000475800 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
SNX13-207ENST00000475800 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 ZNF697Q5TEC3 545 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 RIT2Q99578 217 aa17.12■□□□□ 0.33
SNX13-207ENST00000475800 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
SNX13-207ENST00000475800 DCDC2CA8MYV0 355 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 TBX3O15119 743 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 F2P00734 622 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 LGALS2P05162 132 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 CLTBP09497 229 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 RAG1P15918 1043 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 CDK7P50613 346 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 KRT76Q01546 638 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 SP4Q02446 784 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 PTPN11Q06124 597 aaPredicted RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 TMEM39AQ9NV64 488 aa17.11■□□□□ 0.33
SNX13-207ENST00000475800 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
SNX13-207ENST00000475800 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
SNX13-207ENST00000475800 MSH4O15457 936 aa17.1■□□□□ 0.33
SNX13-207ENST00000475800 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
SNX13-207ENST00000475800 GAS7O60861 476 aa17.1■□□□□ 0.33
SNX13-207ENST00000475800 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
SNX13-207ENST00000475800 TCF7P36402 384 aaPredicted RBP17.1■□□□□ 0.33
SNX13-207ENST00000475800 EPHB4P54760 987 aa17.1■□□□□ 0.33
SNX13-207ENST00000475800 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
SNX13-207ENST00000475800 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
SNX13-207ENST00000475800 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
SNX13-207ENST00000475800 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 H3BRB1 525 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 HAS3O00219 553 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
SNX13-207ENST00000475800 ZNF286BP0CG31 522 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 PSEN2P49810 448 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 ACTR2P61160 394 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 PSMC6P62333 389 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 MFSD10Q14728 455 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 NBPF20Q3BBV1 942 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 SESTD1Q86VW0 696 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 KAT2BQ92831 832 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
SNX13-207ENST00000475800 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 TUT1Q9H6E5 874 aaKnown RBP17.09■□□□□ 0.33
SNX13-207ENST00000475800 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
SNX13-207ENST00000475800 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
SNX13-207ENST00000475800 GRIN2DO15399 1336 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SNX13-207ENST00000475800 SLC37A4O43826 429 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 MARCH6O60337 910 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 LGR5O75473 907 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 ATG7O95352 703 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 SFNP31947 248 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
SNX13-207ENST00000475800 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
SNX13-207ENST00000475800 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
SNX13-207ENST00000475800 WDR64B1ANS9 1081 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 NEMFO60524 1076 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 PSMD10O75832 226 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 SLC26A2P50443 739 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 JAK3P52333 1124 aa17.07■□□□□ 0.32
SNX13-207ENST00000475800 BECN1Q14457 450 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms