RNA–Protein interactions for RNA: ENST00000475621.1

FGFR1-219, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-219ENST00000475621 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
FGFR1-219ENST00000475621 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
FGFR1-219ENST00000475621 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
FGFR1-219ENST00000475621 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 SNHG28P0DPA3 235 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 HYAL1Q12794 435 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 TRAF1Q13077 416 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
FGFR1-219ENST00000475621 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
FGFR1-219ENST00000475621 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
FGFR1-219ENST00000475621 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
FGFR1-219ENST00000475621 PROB1E7EW31 1015 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 PLA2G6O60733 806 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 UPP2O95045 317 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
FGFR1-219ENST00000475621 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
FGFR1-219ENST00000475621 PDCP20941 246 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 CALML3P27482 149 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 SIGLEC14Q08ET2 396 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
FGFR1-219ENST00000475621 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
FGFR1-219ENST00000475621 GRM4Q14833 912 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 ME3Q16798 604 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 ZNF618Q5T7W0 954 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 KCTD1Q719H9 257 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 TRIM22Q8IYM9 498 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 AFG1LQ8WV93 481 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 WASF1Q92558 559 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 HDAC6Q9UBN7 1215 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 PRR12Q9ULL5 1215 aa11.8□□□□□ -0.52
FGFR1-219ENST00000475621 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
FGFR1-219ENST00000475621 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
FGFR1-219ENST00000475621 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 CSPG5O95196 566 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 PDHBP11177 359 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 IFNAR1P17181 557 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 CTNNB1P35222 781 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 NDUFV1P49821 464 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
FGFR1-219ENST00000475621 PTK7Q13308 1070 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 MBTPS1Q14703 1052 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 TEX2Q8IWB9 1127 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 SPZ1Q9BXG8 430 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
FGFR1-219ENST00000475621 LOC730098B7Z3J9 87 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 NFIBO00712 420 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 LINC01565O15544 149 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 TBX10O75333 385 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 ICAM1P05362 532 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 GTF2F1P35269 517 aaKnown RBP eCLIP11.78□□□□□ -0.52
FGFR1-219ENST00000475621 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 KAT2BQ92831 832 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
FGFR1-219ENST00000475621 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
FGFR1-219ENST00000475621 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
FGFR1-219ENST00000475621 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 STK36Q9NRP7 1315 aa11.78□□□□□ -0.52
FGFR1-219ENST00000475621 CACNA1HO95180 2353 aa11.77□□□□□ -0.52
FGFR1-219ENST00000475621 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
FGFR1-219ENST00000475621 TECTAO75443 2155 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 B4DLN1 442 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 KLRF2D3W0D1 207 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 GRM6O15303 877 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
FGFR1-219ENST00000475621 ARIH2O95376 493 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 RB1P06400 928 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 MMP3P08254 477 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 RSPH10BP0C881 870 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 THPOP40225 353 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 MRPL12P52815 198 aaKnown RBP11.77□□□□□ -0.53
FGFR1-219ENST00000475621 NUBP1P53384 320 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 SCRN1Q12765 414 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 STK3Q13188 491 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 ADAM15Q13444 863 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 TRIM71Q2Q1W2 868 aaKnown RBP11.77□□□□□ -0.53
FGFR1-219ENST00000475621 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
FGFR1-219ENST00000475621 SEPT8Q92599 483 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 WNT8BQ93098 351 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 ASIC4Q96FT7 647 aa11.77□□□□□ -0.53
FGFR1-219ENST00000475621 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms