RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 FAM26DQ5JW98 314 aa18■□□□□ 0.47
SRRT-209ENST00000474896 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
SRRT-209ENST00000474896 BANK1Q8NDB2 785 aa18■□□□□ 0.47
SRRT-209ENST00000474896 APBB2Q92870 758 aa18■□□□□ 0.47
SRRT-209ENST00000474896 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
SRRT-209ENST00000474896 SENP7Q9BQF6 1050 aa18■□□□□ 0.47
SRRT-209ENST00000474896 IFIH1Q9BYX4 1025 aaKnown RBP18■□□□□ 0.47
SRRT-209ENST00000474896 ARIH1Q9Y4X5 557 aaPredicted RBP18■□□□□ 0.47
SRRT-209ENST00000474896 GRXCR2A6NFK2 248 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 MEIS2O14770 477 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 CHRNA1P02708 482 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 SSTR3P32745 418 aaPredicted RBP17.99■□□□□ 0.47
SRRT-209ENST00000474896 TIGD5Q53EQ6 642 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 XRRA1Q6P2D8 792 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 EP400NLQ6ZTU2 488 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 NLRX1Q86UT6 975 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 NEK9Q8TD19 979 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 LMBR1Q8WVP7 490 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
SRRT-209ENST00000474896 NRCAMQ92823 1304 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 H3BQ06 376 aaPredicted RBP17.98■□□□□ 0.47
SRRT-209ENST00000474896 PIK3CDO00329 1044 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 PUS10Q3MIT2 529 aaKnown RBP17.98■□□□□ 0.47
SRRT-209ENST00000474896 TCEAL5Q5H9L2 206 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 RUFY4Q6ZNE9 571 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 GIMAP8Q8ND71 665 aaPredicted RBP17.98■□□□□ 0.47
SRRT-209ENST00000474896 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
SRRT-209ENST00000474896 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
SRRT-209ENST00000474896 SGSM2O43147 1006 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 ATP9AO75110 1047 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 KIF5BP33176 963 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 TCF7P36402 384 aaPredicted RBP17.97■□□□□ 0.47
SRRT-209ENST00000474896 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
SRRT-209ENST00000474896 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 FIBCD1Q8N539 461 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
SRRT-209ENST00000474896 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
SRRT-209ENST00000474896 ENPP3O14638 875 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 GHRP10912 638 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 HOXD11P31277 338 aaPredicted RBP17.96■□□□□ 0.47
SRRT-209ENST00000474896 RPAINQ86UA6 219 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 SEPT1Q8WYJ6 367 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 MAP4K1Q92918 833 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
SRRT-209ENST00000474896 NSUN3Q9H649 340 aaKnown RBP17.96■□□□□ 0.47
SRRT-209ENST00000474896 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 EHMT1Q9H9B1 1298 aa17.96■□□□□ 0.47
SRRT-209ENST00000474896 GSTTP1A0A1W2PQM5 241 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 DDAH1O94760 285 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 KCNA2P16389 499 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 CTNNB1P35222 781 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 BMPR1AP36894 532 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 PPFIA1Q13136 1202 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 LPIN1Q14693 890 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 TAF2Q6P1X5 1199 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 CASC1Q6TDU7 716 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 RSPH3Q86UC2 560 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 CMTR1Q8N1G2 835 aaKnown RBP17.95■□□□□ 0.46
SRRT-209ENST00000474896 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
SRRT-209ENST00000474896 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 NLRC5Q86WI3 1866 aa17.95■□□□□ 0.46
SRRT-209ENST00000474896 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 RB1P06400 928 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 ALADP13716 330 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 ITGB5P18084 799 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 MARK3P27448 753 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 GNAQP50148 359 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 MGAT3Q09327 533 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 GRIK4Q16099 956 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 SKAP1Q86WV1 359 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 GLG1Q92896 1179 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 ERAP1Q9NZ08 941 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
SRRT-209ENST00000474896 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
SRRT-209ENST00000474896 PRR33A8MZF0 331 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 C5orf67F2Z3F1 127 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 GRM6O15303 877 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 PRC1O43663 620 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 COL19A1Q14993 1142 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 MARCH8Q5T0T0 291 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 SMARCAD1Q9H4L7 1026 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 TUBE1Q9UJT0 475 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 FAM50BQ9Y247 325 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
SRRT-209ENST00000474896 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
SRRT-209ENST00000474896 MBLAC1A4D2B0 266 aaPredicted RBP17.92■□□□□ 0.46
SRRT-209ENST00000474896 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
SRRT-209ENST00000474896 NCK2O43639 380 aa17.92■□□□□ 0.46
SRRT-209ENST00000474896 LINC00271P0C7V0 271 aa17.92■□□□□ 0.46
SRRT-209ENST00000474896 RXRAP19793 462 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms