RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 LILRB2Q8N423 598 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 KLHL36Q8N4N3 616 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 DNERQ8NFT8 737 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 SEC14L1Q92503 715 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 EXOC2Q96KP1 924 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 IER2Q9BTL4 223 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 PFDN2Q9UHV9 154 aa1.58□□□□□ -2.16
HDAC9-222ENST00000474742 COA3Q9Y2R0 106 aaPredicted RBP1.58□□□□□ -2.16
HDAC9-222ENST00000474742 TCRBV5S4A2TA0A5A2 114 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 CCDC85CA6NKD9 419 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 NOP56O00567 594 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 PDPK1O15530 556 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 PRODHO43272 600 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 RAMP2O60895 175 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 STK10O94804 968 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 FBXO21O94952 628 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 FGFR1P11362 822 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 PABPC1P11940 636 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 ZNF28P17035 718 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 ATP2B1P20020 1258 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 MAKP20794 623 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 COMTP21964 271 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 RPL11P62913 178 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 DGCR2P98153 550 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 MAP4K2Q12851 820 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 RASGRF1Q13972 1273 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 R3HDM1Q15032 1099 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 FAM209AQ5JX71 171 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 MIIPQ5JXC2 388 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 ACBD5Q5T8D3 534 aaPredicted RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 E4F1Q66K89 784 aaPredicted RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 POMZP3Q6PJE2 187 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TMC5Q6UXY8 1006 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 EEPD1Q7L9B9 569 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TAX1BP1Q86VP1 789 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 C1orf210Q8IVY1 113 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 FAM126BQ8IXS8 530 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 RBM12BQ8IXT5 1001 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 PPIL6Q8IXY8 311 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 JMYQ8N9B5 988 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 ST13P5Q8NFI4 369 aaPredicted RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 DIO2Q92813 273 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 EXTL1Q92935 676 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TRMT2BQ96GJ1 504 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TOE1Q96GM8 510 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 SGSM3Q96HU1 749 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 CHAMP1Q96JM3 812 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 YTHDC1Q96MU7 727 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 WWC2-AS2Q96NR7 200 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TMEM209Q96SK2 561 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 DNAJC2Q99543 621 aaKnown RBP1.57□□□□□ -2.16
HDAC9-222ENST00000474742 DNAJC7Q99615 494 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 SPATA9Q9BWV2 254 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 JAM3Q9BX67 310 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 CCDC113Q9H0I3 377 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 EPN3Q9H201 632 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 SEC61A2Q9H9S3 476 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 SNTG2Q9NY99 539 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 LRP2BPQ9P2M1 347 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TRAF6Q9Y4K3 522 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TELO2Q9Y4R8 837 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 PCDHA2Q9Y5H9 948 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 TNFRSF18Q9Y5U5 241 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 X6R8D5 127 aa1.57□□□□□ -2.16
HDAC9-222ENST00000474742 NKRFO15226 690 aaKnown RBP eCLIP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MEFVO15553 781 aaPredicted RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 FOXS1O43638 330 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MYO1BO43795 1136 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 TADA3O75528 432 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CPP00450 1065 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 LTFP02788 710 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 KCNA6P17658 529 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 ACO1P21399 889 aaKnown RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 BMP5P22003 454 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 LTBRP36941 435 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 KCNJ6P48051 423 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MLLT6P55198 1093 aaPredicted RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 RAC3P60763 192 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MRPS21P82921 87 aaKnown RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 HHEXQ03014 270 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 FSTL1Q12841 308 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 ADAM9Q13443 819 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CHRNA2Q15822 529 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CR1LQ2VPA4 569 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 HABP4Q5JVS0 413 aaKnown RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PRR31Q5SQ13 230 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MROH9Q5TGP6 573 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 FSTL4Q6MZW2 842 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 TCTN3Q6NUS6 607 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PKN3Q6P5Z2 889 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 NSMFQ6X4W1 530 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CEP68Q76N32 757 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MRGPRGQ86SM5 289 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 PROSER1Q86XN7 944 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 MIB1Q86YT6 1006 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 RIOX2Q8IUF8 465 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CKAP2LQ8IYA6 745 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 CRACR2BQ8N4Y2 399 aaPredicted RBP1.56□□□□□ -2.16
HDAC9-222ENST00000474742 AMER2Q8N7J2 671 aa1.56□□□□□ -2.16
HDAC9-222ENST00000474742 ZBTB38Q8NAP3 1195 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms