RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 VAV3Q9UKW4 847 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 DNM3Q9UQ16 869 aa11.5□□□□□ -0.57
PRPF38A-202ENST00000474048 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 EDIL3O43854 480 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 COBLO75128 1261 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 MYL1P05976 194 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 TXNP10599 105 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 HSPA6P17066 643 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 CYP2B6P20813 491 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 RPA1P27694 616 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 LONRF3Q496Y0 759 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 MFSD14CQ5VZR4 134 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 FAM160B1Q5W0V3 765 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 TINF2Q9BSI4 451 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 POLR3CQ9BUI4 534 aaPredicted RBP11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 NAT10Q9H0A0 1025 aaKnown RBP11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 TSPY26PQ9H489 355 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 AZI2Q9H6S1 392 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 RNF186Q9NXI6 227 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 PCDHA10Q9Y5I2 948 aa11.49□□□□□ -0.57
PRPF38A-202ENST00000474048 MCM3APO60318 1980 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 ACTN4O43707 911 aaKnown RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 SORBS3O60504 671 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 GGPS1O95749 300 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 GNRH1P01148 92 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 P4HBP07237 508 aaKnown RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 HTRA3P83110 453 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 ITGB3BPQ13352 177 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 STX1AQ16623 288 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 MORN1Q5T089 497 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 LRSAM1Q6UWE0 723 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 MORC4Q8TE76 937 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 LXNQ9BS40 222 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 GTPBP4Q9BZE4 634 aaKnown RBP11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 ZSWIM4Q9H7M6 989 aa11.48□□□□□ -0.57
PRPF38A-202ENST00000474048 ASTN1O14525 1302 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 NKRFO15226 690 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 FKTNO75072 461 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 GH1P01241 217 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 HOXC6P09630 235 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 KCNA2P16389 499 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 PSMC5P62195 406 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 ASIC1P78348 528 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 SPIRE1Q08AE8 756 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 GRB10Q13322 594 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 PNOCQ13519 176 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 CTTNQ14247 550 aaKnown RBP11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 TMEM119Q4V9L6 283 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 OLFML2BQ68BL8 750 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 METTL7BQ6UX53 244 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 RAD54LQ92698 747 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 PAGE5Q96GU1 130 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 ANO10Q9NW15 660 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 KIAA1468Q9P260 1216 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 CASP8AP2Q9UKL3 1982 aa11.47□□□□□ -0.57
PRPF38A-202ENST00000474048 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 GPR25O00155 361 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 ATP9AO75110 1047 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 TBCAO75347 108 aaKnown RBP11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 MED24O75448 989 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 CAVIN2O95810 425 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 PLA2G4BP0C869 781 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 ZNF445P59923 1031 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 C1QTNF8P60827 252 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 ACTR2P61160 394 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 TPM4P67936 248 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 IRF5Q13568 498 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 STIM1Q13586 685 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
PRPF38A-202ENST00000474048 E2F4Q16254 413 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms