RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 GRM4Q14833 912 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 SERINC5Q86VE9 423 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 MYOCDQ8IZQ8 938 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 EPAS1Q99814 870 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 SETD4Q9NVD3 440 aa13.79□□□□□ -0.2
SRCAP-204ENST00000474008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.78□□□□□ -0.2
SRCAP-204ENST00000474008 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 UPP2O95045 317 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 LGALS2P05162 132 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 USP17L6PQ6QN14 398 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 CMTR1Q8N1G2 835 aaKnown RBP13.78□□□□□ -0.2
SRCAP-204ENST00000474008 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
SRCAP-204ENST00000474008 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 TGS1Q96RS0 853 aaKnown RBP13.78□□□□□ -0.2
SRCAP-204ENST00000474008 RIOX1Q9H6W3 641 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 COG5Q9UP83 839 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
SRCAP-204ENST00000474008 C17orf102A2RUQ5 167 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 H3BRB1 525 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 IL9P15248 144 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 KCNA5P22460 613 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 COL4A4P53420 1690 aaPredicted RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 TROAPQ12815 778 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 TYW1BQ6NUM6 668 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 RUFY4Q6ZNE9 571 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
SRCAP-204ENST00000474008 CDHR5Q9HBB8 845 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
SRCAP-204ENST00000474008 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.76□□□□□ -0.21
SRCAP-204ENST00000474008 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 H3BQ06 376 aaPredicted RBP13.76□□□□□ -0.21
SRCAP-204ENST00000474008 CSPG5O95196 566 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 HOXC8P31273 242 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
SRCAP-204ENST00000474008 PLEKHG4Q58EX7 1191 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 TTC22Q5TAA0 569 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 GPR20Q99678 358 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 KATNAL1Q9BW62 490 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
SRCAP-204ENST00000474008 CNNM2Q9H8M5 875 aa13.76□□□□□ -0.21
SRCAP-204ENST00000474008 MYH7BA7E2Y1 1941 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 SPATA31C2B4DYI2 1134 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 E7EWF7 191 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 ATP9AO75110 1047 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 RXRAP19793 462 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 CHMLP26374 656 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 CCND2P30279 289 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 PLA2G5P39877 138 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 MAF1Q9H063 256 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 LAMA4Q16363 1823 aa13.75□□□□□ -0.21
SRCAP-204ENST00000474008 HIP1O00291 1037 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 MEIS2O14770 477 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 PLEKHA8P1O95397 391 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 CHRNA1P02708 482 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 TSR1Q2NL82 804 aaKnown RBP13.74□□□□□ -0.21
SRCAP-204ENST00000474008 ZNF454Q8N9F8 522 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
SRCAP-204ENST00000474008 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 NPDC1Q9NQX5 325 aaPredicted RBP13.74□□□□□ -0.21
SRCAP-204ENST00000474008 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
SRCAP-204ENST00000474008 AMHP03971 560 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 MARK3P27448 753 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 ADAM17P78536 824 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 PTGDRQ13258 359 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 WTAPQ15007 396 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 TCEAL5Q5H9L2 206 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 MB21D2Q8IYB1 491 aaPredicted RBP13.73□□□□□ -0.21
SRCAP-204ENST00000474008 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 TOP1MTQ969P6 601 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
SRCAP-204ENST00000474008 NOP56O00567 594 aaKnown RBP13.72□□□□□ -0.21
SRCAP-204ENST00000474008 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
SRCAP-204ENST00000474008 TGFB3P10600 412 aa13.72□□□□□ -0.21
SRCAP-204ENST00000474008 GHRP10912 638 aa13.72□□□□□ -0.21
SRCAP-204ENST00000474008 ICAM3P32942 547 aa13.72□□□□□ -0.21
SRCAP-204ENST00000474008 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.21
SRCAP-204ENST00000474008 UBE2SQ16763 222 aa13.72□□□□□ -0.21
SRCAP-204ENST00000474008 LEXMQ3ZCV2 418 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms