RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 CWF19L1Q69YN2 538 aaKnown RBP13.1□□□□□ -0.31
MACF1-215ENST00000473843 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
MACF1-215ENST00000473843 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 CDCA3Q99618 268 aaPredicted RBP13.1□□□□□ -0.31
MACF1-215ENST00000473843 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
MACF1-215ENST00000473843 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
MACF1-215ENST00000473843 MRPL42Q9Y6G3 142 aaKnown RBP13.1□□□□□ -0.31
MACF1-215ENST00000473843 ANP32CO43423 234 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 DGKIO75912 1065 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 IFIT2P09913 472 aaKnown RBP13.09□□□□□ -0.31
MACF1-215ENST00000473843 AOC1P19801 751 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 SLC16A2P36021 539 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 TDO2P48775 406 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
MACF1-215ENST00000473843 TFAP4Q01664 338 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 CMTR2Q8IYT2 770 aaKnown RBP13.09□□□□□ -0.31
MACF1-215ENST00000473843 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
MACF1-215ENST00000473843 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
MACF1-215ENST00000473843 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 CACNA1IQ9P0X4 2223 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
MACF1-215ENST00000473843 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 ATP5JP18859 108 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 COL9A2Q14055 689 aaPredicted RBP13.08□□□□□ -0.32
MACF1-215ENST00000473843 STXBP2Q15833 593 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 DUSP6Q16828 381 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
MACF1-215ENST00000473843 FAM26DQ5JW98 314 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 DTWD2Q8NBA8 298 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 FLCNQ8NFG4 579 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
MACF1-215ENST00000473843 CNOT1A5YKK6 2376 aaKnown RBP13.08□□□□□ -0.32
MACF1-215ENST00000473843 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 ZFYVE26Q68DK2 2539 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 PER2O15055 1255 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 TREHO43280 583 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 ANKRD54Q6NXT1 300 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 NSUN6Q8TEA1 469 aaKnown RBP13.07□□□□□ -0.32
MACF1-215ENST00000473843 RUBCNQ92622 972 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 RTP3Q9BQQ7 232 aa13.07□□□□□ -0.32
MACF1-215ENST00000473843 FNDC1Q4ZHG4 1894 aaPredicted RBP13.06□□□□□ -0.32
MACF1-215ENST00000473843 ENPP3O14638 875 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
MACF1-215ENST00000473843 SMIM10L2AP0DMW4 78 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 SMIM10L2BP0DMW5 78 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 GNAT2P19087 354 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 TECP42680 631 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 UBE3AQ05086 875 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 MAF1Q9H063 256 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
MACF1-215ENST00000473843 PI15O43692 258 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
MACF1-215ENST00000473843 SDHBP21912 280 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 KCNC3Q14003 757 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 SPATA33Q96N06 139 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 NECTIN4Q96NY8 510 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 RNPEPQ9H4A4 650 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 R4GN57 208 aa13.05□□□□□ -0.32
MACF1-215ENST00000473843 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 FRYLO94915 3013 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 H3BRB1 525 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 GPAA1O43292 621 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 NMT2O60551 498 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 SEC24BO95487 1268 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 APPP05067 770 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 ASGR2P07307 311 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 GHRP10912 638 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 GNAT1P11488 350 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 NPR3P17342 541 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 HSDL1Q3SXM5 330 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 PDE12Q6L8Q7 609 aaKnown RBP13.04□□□□□ -0.32
MACF1-215ENST00000473843 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
MACF1-215ENST00000473843 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
MACF1-215ENST00000473843 OSBP2Q969R2 916 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
MACF1-215ENST00000473843 APOL5Q9BWW9 433 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms