RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 DEXIO95424 95 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 LGALS2P05162 132 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 CKBP12277 381 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 HIC1Q14526 733 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 GPNMBQ14956 572 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 TRIM71Q2Q1W2 868 aaKnown RBP20.63■□□□□ 0.89
SNX4-204ENST00000473417 GTF3C6Q969F1 213 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 SLC9A7Q96T83 725 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 FTOQ9C0B1 505 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNX4-204ENST00000473417 PRDM12Q9H4Q4 367 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 VPS54Q9P1Q0 977 aa20.63■□□□□ 0.89
SNX4-204ENST00000473417 SPDYE3A6NKU9 549 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 NOP56O00567 594 aaKnown RBP20.62■□□□□ 0.89
SNX4-204ENST00000473417 PARNO95453 639 aaKnown RBP20.62■□□□□ 0.89
SNX4-204ENST00000473417 CTDNEP1O95476 244 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 HOXC8P31273 242 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 CYFIP1Q7L576 1253 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 CCDC12Q8WUD4 166 aaPredicted RBP20.62■□□□□ 0.89
SNX4-204ENST00000473417 WNT8BQ93098 351 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 AIFM3Q96NN9 605 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 GAS2L1Q99501 681 aaPredicted RBP20.62■□□□□ 0.89
SNX4-204ENST00000473417 GPR20Q99678 358 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
SNX4-204ENST00000473417 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
SNX4-204ENST00000473417 H3BRB1 525 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 CXCL10P02778 98 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 MYOGP15173 224 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
SNX4-204ENST00000473417 PPP2R2DQ66LE6 453 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 TRAF7Q6Q0C0 670 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 NLRX1Q86UT6 975 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 PHOSPHO2Q8TCD6 241 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 GPRASP2Q96D09 838 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 PGBD1Q96JS3 809 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 GLT8D2Q9H1C3 349 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 TUT1Q9H6E5 874 aaKnown RBP20.61■□□□□ 0.89
SNX4-204ENST00000473417 C6orf50Q9HD87 102 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 TMEM260Q9NX78 707 aa20.61■□□□□ 0.89
SNX4-204ENST00000473417 ESYT2A0FGR8 921 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 ST18O60284 1047 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 NBNO60934 754 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 ST3GAL1Q11201 340 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 JAKMIP3Q5VZ66 844 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 USP38Q8NB14 1042 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 CCDC148Q8NFR7 591 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 ZMYND12Q9H0C1 365 aa20.6■□□□□ 0.89
SNX4-204ENST00000473417 ADAMTS3O15072 1205 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 GNA11P29992 359 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 NLRP5P59047 1200 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 ADGRE1Q14246 886 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 ZNF618Q5T7W0 954 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 CNKSR3Q6P9H4 555 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 CCDC83Q8IWF9 413 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
SNX4-204ENST00000473417 ZSCAN31Q96LW9 406 aaPredicted RBP20.59■□□□□ 0.89
SNX4-204ENST00000473417 SH3GLB2Q9NR46 395 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
SNX4-204ENST00000473417 TELO2Q9Y4R8 837 aa20.59■□□□□ 0.89
SNX4-204ENST00000473417 STK36Q9NRP7 1315 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 C17orf102A2RUQ5 167 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 FOSP01100 380 aaPredicted RBP20.58■□□□□ 0.89
SNX4-204ENST00000473417 SMIM10L2AP0DMW4 78 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 SMIM10L2BP0DMW5 78 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 KCNA2P16389 499 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 ITGB5P18084 799 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 CLK2P49760 499 aaKnown RBP20.58■□□□□ 0.89
SNX4-204ENST00000473417 WDR5P61964 334 aaKnown RBP20.58■□□□□ 0.89
SNX4-204ENST00000473417 MBTPS1Q14703 1052 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 TRIM50Q86XT4 487 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 HERC6Q8IVU3 1022 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 TEX2Q8IWB9 1127 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 NSUN7Q8NE18 718 aaKnown RBP20.58■□□□□ 0.89
SNX4-204ENST00000473417 CDHR1Q96JP9 859 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 ANO3Q9BYT9 981 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 EHMT1Q9H9B1 1298 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
SNX4-204ENST00000473417 JAK2O60674 1132 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 ATP9AO75110 1047 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 CA3P07451 260 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 FDPSP14324 419 aaKnown RBP20.57■□□□□ 0.88
SNX4-204ENST00000473417 KCNJ6P48051 423 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 AP3B2Q13367 1082 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 TCTN1Q2MV58 587 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 ATP6V0A1Q93050 837 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 RNPEPQ9H4A4 650 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
SNX4-204ENST00000473417 ZNF215Q9UL58 517 aaPredicted RBP20.57■□□□□ 0.88
SNX4-204ENST00000473417 WDR81Q562E7 1941 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
SNX4-204ENST00000473417 TREHO43280 583 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 CD2BP2O95400 341 aaKnown RBP20.56■□□□□ 0.88
SNX4-204ENST00000473417 SP4Q02446 784 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 MTMR1Q13613 665 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 REXO1Q8N1G1 1221 aaKnown RBP20.56■□□□□ 0.88
SNX4-204ENST00000473417 BICD2Q8TD16 824 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 RASGRP4Q8TDF6 673 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 KCNJ14Q9UNX9 436 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms