RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 PCDHA12Q9UN75 941 aa8.5□□□□□ -1.05
CCDC171-205ENST00000472806 LUC7L2Q9Y383 392 aaKnown RBP8.5□□□□□ -1.05
CCDC171-205ENST00000472806 PCDHA1Q9Y5I3 950 aa8.5□□□□□ -1.05
CCDC171-205ENST00000472806 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 SPDYE3A6NKU9 549 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 PES1O00541 588 aaKnown RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 RAD21O60216 631 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 URI1O94763 535 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 TDP2O95551 362 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 GNA14O95837 355 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 GYPCP04921 128 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 BMP3P12645 472 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 CYLC1P35663 651 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 KRT83P78385 493 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 TCP10Q12799 353 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 IKQ13123 557 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 GRB10Q13322 594 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 AOC3Q16853 763 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 ARHGAP29Q52LW3 1261 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 FIGNQ5HY92 759 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 FKBP1CQ5VVH2 108 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 TTBK2Q6IQ55 1244 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 TRIM65Q6PJ69 517 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 BTNL9Q6UXG8 535 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 FBXO11Q86XK2 927 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 CPLX3Q8WVH0 158 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 UBXN4Q92575 508 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 PSMD1Q99460 953 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 PLIN2Q99541 437 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 TUBGCP2Q9BSJ2 902 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 MMTAG2Q9BU76 263 aaKnown RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 ANO3Q9BYT9 981 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 GOPCQ9HD26 462 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 ZNF215Q9UL58 517 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-205ENST00000472806 CAPN11Q9UMQ6 739 aa8.49□□□□□ -1.05
CCDC171-205ENST00000472806 A0A1W2PQJ5 194 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 DDTLA6NHG4 134 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 EFCAB8A8MWE9 144 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 F5H6K3 240 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 SLC37A4O43826 429 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 TIMP2P16035 220 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CTHP32929 405 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 KRT9P35527 623 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 SLC16A2P36021 539 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 KLRC3Q07444 240 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 GOLGA8FQ08AF8 430 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 GOLGA8DPQ0D2H9 430 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 MCM6Q14566 821 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 DLGAP5Q15398 846 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 UBE2SQ16763 222 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 Q4G0T1 1027 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CENPPQ6IPU0 288 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 RSBN1LQ6PCB5 846 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 ARHGAP27Q6ZUM4 889 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 TOGARAM2Q6ZUX3 1019 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CCDC170Q8IYT3 715 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CEP112Q8N8E3 955 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 C7orf43Q8WVR3 580 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 CNOT6LQ96LI5 555 aaKnown RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 FAM20AQ96MK3 541 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 MBOAT7Q96N66 472 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 PNMA5Q96PV4 448 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 PURBQ96QR8 312 aaKnown RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 EDEM3Q9BZQ6 932 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 DNAJC18Q9H819 358 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC171-205ENST00000472806 BLOC1S4Q9NUP1 217 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 MAPK8IP1Q9UQF2 711 aa8.48□□□□□ -1.05
CCDC171-205ENST00000472806 TRIM49BA6NDI0 452 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 MYMKA6NI61 221 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 PPP1R11O60927 126 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 NDUFB10O96000 172 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 IDEP14735 1019 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 TRIM21P19474 475 aaKnown RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 FXR1P51114 621 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ZBED6P86452 979 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 CDK17Q00537 523 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 TBC1D8BQ0IIM8 1120 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 MAN2A1Q16706 1144 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ANKRD40Q6AI12 368 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 FAM160B2Q86V87 743 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 CLEC10AQ8IUN9 316 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ZFPM1Q8IX07 1006 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 MYOCDQ8IZQ8 938 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ZNF507Q8TCN5 953 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 CHURC1Q8WUH1 139 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms