RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 CYP2D7A0A087X1C5 515 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 RBM47A0AV96 593 aaKnown RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 LGR5O75473 907 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 MBD4O95243 580 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 TTLL1O95922 423 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 IQCF3P0C7M6 154 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 BMP3P12645 472 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 WEE1P30291 646 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 GSK3AP49840 483 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 CPT1AP50416 773 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 GRB10Q13322 594 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 BFSP2Q13515 415 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.9□□□□□ -1.35e-6■□□□□ 10.3
ITGB1-209ENST00000472147 LRRFIP1Q32MZ4 808 aaKnown RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 LEXMQ3ZCV2 418 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 CEP85Q6P2H3 762 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 NFRKBQ6P4R8 1299 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 KIAA1211Q6ZU35 1233 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 FAM160B2Q86V87 743 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 CLEC10AQ8IUN9 316 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 SCLYQ96I15 445 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 STRBPQ96SI9 672 aaKnown RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 RAD9AQ99638 391 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 HAUS7Q99871 368 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 HINFPQ9BQA5 517 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 FTOQ9C0B1 505 aaKnown RBP eCLIP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 TSPAN10Q9H1Z9 355 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 C11orf16Q9NQ32 467 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 MTMR4Q9NYA4 1195 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 ADD3Q9UEY8 706 aaKnown RBP6.9□□□□□ -1.3
ITGB1-209ENST00000472147 CTNNA3Q9UI47 895 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 UMODL1Q5DID0 1318 aa6.9□□□□□ -1.3
ITGB1-209ENST00000472147 SIPA1L1O43166 1804 aa6.9□□□□□ -1.31
ITGB1-209ENST00000472147 IGKV6D-41A0A0C4DH26 115 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 B4DLN1 442 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 PATL2C9JE40 543 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 NKRFO15226 690 aaKnown RBP eCLIP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 MAN1A2O60476 641 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 LPXNO60711 386 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 EFCAB14O75071 495 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 CYP2C9P11712 490 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 GNAT2P19087 354 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 MRPL12P52815 198 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 PURAQ00577 322 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 C4orf17Q53FE4 359 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 WDR44Q5JSH3 913 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 SLFN13Q68D06 897 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 RCSD1Q6JBY9 416 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 DEFB128Q7Z7B8 93 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 SLC9A9Q8IVB4 645 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 FTSJ3Q8IY81 847 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 NEDD1Q8NHV4 660 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 CLP1Q92989 425 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 MTG1Q9BT17 334 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 WDR11Q9BZH6 1224 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 BOLA2Q9H3K6 86 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 CERS4Q9HA82 394 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 IL1RAPL2Q9NP60 686 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 A1CFQ9NQ94 594 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 TRMT13Q9NUP7 481 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 CYP39A1Q9NYL5 469 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 EXOC6BQ9Y2D4 811 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 TNKSO95271 1327 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 ZBED9Q6R2W3 1325 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 ZNFX1Q9P2E3 1918 aaKnown RBP6.89□□□□□ -1.31
ITGB1-209ENST00000472147 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
ITGB1-209ENST00000472147 ABHD14A-ACY1A0A1B0GW23 586 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 EPOPA6NHQ4 379 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 GSG1L2A8MUP6 293 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 TMEM232C9JQI7 657 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 NCK2O43639 380 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 HMMRO75330 724 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 RHOQP17081 205 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 KCNJ6P48051 423 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 MRE11P49959 708 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 STAT2P52630 851 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 ERVK-21P61565 698 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 PSMC6P62333 389 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 TEAD4Q15561 434 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 OCLNQ16625 522 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 LRRC47Q8N1G4 583 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms