RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
SNX13-205ENST00000471744 SLC5A5Q92911 643 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 H3BRB1 525 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 HAS3O00219 553 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
SNX13-205ENST00000471744 ZNF286BP0CG31 522 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 PSEN2P49810 448 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 ACTR2P61160 394 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 PSMC6P62333 389 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 MFSD10Q14728 455 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 NBPF20Q3BBV1 942 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 SESTD1Q86VW0 696 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 ETNPPLQ8TBG4 499 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 KAT2BQ92831 832 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 TUT1Q9H6E5 874 aaKnown RBP17.09■□□□□ 0.33
SNX13-205ENST00000471744 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
SNX13-205ENST00000471744 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
SNX13-205ENST00000471744 GRIN2DO15399 1336 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 GSTTP1A0A1W2PQM5 241 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SNX13-205ENST00000471744 SLC37A4O43826 429 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 MARCH6O60337 910 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
SNX13-205ENST00000471744 LGR5O75473 907 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 ATG7O95352 703 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 SFNP31947 248 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 TLE2Q04725 743 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
SNX13-205ENST00000471744 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 C7orf61Q8IZ16 206 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
SNX13-205ENST00000471744 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 PRKAG2Q9UGJ0 569 aa17.08■□□□□ 0.32
SNX13-205ENST00000471744 WDR64B1ANS9 1081 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 NEMFO60524 1076 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 PSMD10O75832 226 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 CLTBP09497 229 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 SLC26A2P50443 739 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 JAK3P52333 1124 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 BECN1Q14457 450 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 GLG1Q92896 1179 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
SNX13-205ENST00000471744 CCNE2O96020 404 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 PSAPP07602 524 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 CALCRLQ16602 461 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 TTC38Q5R3I4 469 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 ABHD15Q6UXT9 468 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 BRAPQ7Z569 592 aa17.06■□□□□ 0.32
SNX13-205ENST00000471744 MKI67P46013 3256 aaKnown RBP17.06■□□□□ 0.32
SNX13-205ENST00000471744 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
SNX13-205ENST00000471744 BACH1O14867 736 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 CD4P01730 458 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 GNAT1P11488 350 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 SYT1P21579 422 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 STAT5BP51692 787 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 GTF2IRD1Q9UHL9 959 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 SAMM50Q9Y512 469 aa17.05■□□□□ 0.32
SNX13-205ENST00000471744 MCM7P33993 719 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 FAAP100Q0VG06 881 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 HAS1Q92839 578 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 UIMC1Q96RL1 719 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 UNC45AQ9H3U1 944 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 TMEM39AQ9NV64 488 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 HDAC6Q9UBN7 1215 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 NOD1Q9Y239 953 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
SNX13-205ENST00000471744 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
SNX13-205ENST00000471744 KIAA0355O15063 1070 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms