RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 MAN2B1O00754 1011 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 AQP7O14520 342 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 RASGRP1O95267 797 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 PDE6AP16499 860 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 JAM2P57087 298 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 SEC23AQ15436 765 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 RGL3Q3MIN7 710 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 TRIM61Q5EBN2 209 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 ABHD17CQ6PCB6 329 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 TRIM48Q8IWZ4 208 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 OSBPL2Q9H1P3 480 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 SMURF1Q9HCE7 757 aa7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-206ENST00000471167 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 MAFKO60675 156 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 IL18BPO95998 194 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 SQSTM1Q13501 440 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 SOGA3Q5TF21 947 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 ARHGAP36Q6ZRI8 547 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 FGD2Q7Z6J4 655 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 MTDHQ86UE4 582 aaKnown RBP7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 PTCH2Q9Y6C5 1203 aa7.68□□□□□ -1.18
PRPF40A-206ENST00000471167 KCNQ2O43526 872 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 C2orf27AQ580R0 203 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 FAM26FQ5R3K3 315 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 C16orf59Q7L2K0 433 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 DPH6Q7L8W6 267 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 PTRH1Q86Y79 214 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 THAP3Q8WTV1 239 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 FBXW5Q969U6 566 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 CLUHP3Q96NS8 147 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 RBM15Q96T37 977 aaKnown RBP eCLIP7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 CROTQ9UKG9 612 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 SRPK3Q9UPE1 567 aa7.67□□□□□ -1.18
PRPF40A-206ENST00000471167 KCNK3O14649 394 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 CNR2P34972 360 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 PFKPQ01813 784 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 GPR19Q15760 415 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 TMEM209Q96SK2 561 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 SSBP3Q9BWW4 388 aaPredicted RBP7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 PIF1Q9H611 641 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 TRIM39Q9HCM9 518 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 NDOR1Q9UHB4 597 aa7.66□□□□□ -1.18
PRPF40A-206ENST00000471167 B4GALT3O60512 393 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 KLHL18O94889 574 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 SYN1P17600 705 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 GJA9P57773 515 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 BMS1Q14692 1282 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 SKIDA1Q1XH10 827 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 ZC3H12BQ5HYM0 836 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 CLIC6Q96NY7 704 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 USP40Q9NVE5 1235 aa7.65□□□□□ -1.18
PRPF40A-206ENST00000471167 TCRBV16S1A1N1A0A5B0 115 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 CCDC66A2RUB6 948 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 MROH6A6NGR9 719 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 ZNF839A8K0R7 811 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 KNG1P01042 644 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 PTPN1P18031 435 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 NUDT10Q8NFP7 164 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 NUDT11Q96G61 164 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 NCOA5Q9HCD5 579 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 KCND1Q9NSA2 647 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 COQ6Q9Y2Z9 468 aa7.64□□□□□ -1.19
PRPF40A-206ENST00000471167 C4BPAP04003 597 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 KRT15P19012 456 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 NFKB2Q00653 900 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 DBPQ10586 325 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 TBC1D10BQ4KMP7 808 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 BTBD8Q5XKL5 378 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 OVCH1Q7RTY7 1134 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 BRAPQ7Z569 592 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 ZSWIM2Q8NEG5 633 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 SLC39A2Q9NP94 309 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 DLL4Q9NR61 685 aa7.63□□□□□ -1.19
PRPF40A-206ENST00000471167 RAPGEF3O95398 923 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 GLRBP48167 497 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 DNM2P50570 870 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 CCDC144BQ3MJ40 725 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 UBXN11Q5T124 520 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 PRAMEF18Q5VWM3 479 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 VASNQ6EMK4 673 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 PKN3Q6P5Z2 889 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 NOSTRINQ8IVI9 506 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 STPG3Q8N7X2 389 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 BDH2Q9BUT1 245 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 MRPL4Q9BYD3 311 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 BTBD7Q9P203 1132 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 ZFP69BQ9UJL9 534 aa7.62□□□□□ -1.19
PRPF40A-206ENST00000471167 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms