RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 HDAC6Q9UBN7 1215 aa20.25■□□□□ 0.83
LMNA-211ENST00000470199 DDX25Q9UHL0 483 aaKnown RBP20.25■□□□□ 0.83
LMNA-211ENST00000470199 H3BRB1 525 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 K7ELQ4 463 aaPredicted RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 CCNT1O60563 726 aaKnown RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 ZNF200P98182 395 aaPredicted RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 GDF6Q6KF10 455 aaPredicted RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 NFRKBQ6P4R8 1299 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 ETNPPLQ8TBG4 499 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 SLC5A5Q92911 643 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 CTAGE1Q96RT6 745 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 RNPEPQ9H4A4 650 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
LMNA-211ENST00000470199 TBX21Q9UL17 535 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 PDE4DIPQ5VU43 2346 aa20.24■□□□□ 0.83
LMNA-211ENST00000470199 CYP2C9P11712 490 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 MARK3P27448 753 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
LMNA-211ENST00000470199 SAFBQ15424 915 aaKnown RBP eCLIP20.23■□□□□ 0.83
LMNA-211ENST00000470199 MOXD1Q6UVY6 613 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 SNX21Q969T3 373 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.23■□□□□ 0.83
LMNA-211ENST00000470199 UMODL1Q5DID0 1318 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 MROH7Q68CQ1 1323 aa20.23■□□□□ 0.83
LMNA-211ENST00000470199 KIAA0355O15063 1070 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 LGR5O75473 907 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 ATG7O95352 703 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 MAGEA10P43363 369 aaPredicted RBP20.22■□□□□ 0.83
LMNA-211ENST00000470199 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 ABHD15Q6UXT9 468 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 C7orf31Q8N865 590 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 KATNAL1Q9BW62 490 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
LMNA-211ENST00000470199 UNC45AQ9H3U1 944 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 GTF2IRD1Q9UHL9 959 aa20.22■□□□□ 0.83
LMNA-211ENST00000470199 TLR3O15455 904 aaKnown RBP20.21■□□□□ 0.83
LMNA-211ENST00000470199 PSMD10O75832 226 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 SMIM10L2AP0DMW4 78 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 SMIM10L2BP0DMW5 78 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 LRCH2Q5VUJ6 765 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 SESTD1Q86VW0 696 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 HAS1Q92839 578 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 BADQ92934 168 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 PPP1R12CQ9BZL4 782 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 KCNMB3Q9NPA1 279 aa20.21■□□□□ 0.83
LMNA-211ENST00000470199 IGKV6D-21A0A0A0MT36 114 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 CHMP2AO43633 222 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 GAS7O60861 476 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 SUPT20HL2P0C7V6 817 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 PTPN11Q06124 597 aaPredicted RBP20.2■□□□□ 0.82
LMNA-211ENST00000470199 NBR1Q14596 966 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 PTGISQ16647 500 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 CHRDL2Q6WN34 429 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 CCDC60Q8IWA6 550 aaPredicted RBP20.2■□□□□ 0.82
LMNA-211ENST00000470199 GLG1Q92896 1179 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 WNT8BQ93098 351 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 RIT2Q99578 217 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 SEZ6LQ9BYH1 1024 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 SETD4Q9NVD3 440 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 PRKAG2Q9UGJ0 569 aa20.2■□□□□ 0.82
LMNA-211ENST00000470199 RAG1P15918 1043 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 GCFC2P16383 781 aaKnown RBP20.19■□□□□ 0.82
LMNA-211ENST00000470199 U2AF2P26368 475 aaKnown RBP eCLIP20.19■□□□□ 0.82
LMNA-211ENST00000470199 CYP2C18P33260 490 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 LARP1BQ659C4 914 aaKnown RBP20.19■□□□□ 0.82
LMNA-211ENST00000470199 ZNF746Q6NUN9 644 aaPredicted RBP20.19■□□□□ 0.82
LMNA-211ENST00000470199 SWSAP1Q6NVH7 229 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 DHX38Q92620 1227 aaKnown RBP20.19■□□□□ 0.82
LMNA-211ENST00000470199 ZBTB10Q96DT7 871 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 GDF15Q99988 308 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 NOC4LQ9BVI4 516 aaKnown RBP20.19■□□□□ 0.82
LMNA-211ENST00000470199 TEKT3Q9BXF9 490 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 EMSYQ7Z589 1322 aa20.19■□□□□ 0.82
LMNA-211ENST00000470199 TIMP1P01033 207 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 ATP4AP20648 1035 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 TOB1P50616 345 aaPredicted RBP20.18■□□□□ 0.82
LMNA-211ENST00000470199 STAT5BP51692 787 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 KRT76Q01546 638 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 GNL2Q13823 731 aaKnown RBP20.18■□□□□ 0.82
LMNA-211ENST00000470199 ZNF174Q15697 407 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 TMEM60Q9H2L4 133 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 ERAP1Q9NZ08 941 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 VAV3Q9UKW4 847 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 ZNF215Q9UL58 517 aaPredicted RBP20.18■□□□□ 0.82
LMNA-211ENST00000470199 COLQQ9Y215 455 aaPredicted RBP20.18■□□□□ 0.82
LMNA-211ENST00000470199 LTBP2Q14767 1821 aa20.18■□□□□ 0.82
LMNA-211ENST00000470199 H3BQV1 296 aa20.17■□□□□ 0.82
LMNA-211ENST00000470199 EML1O00423 815 aa20.17■□□□□ 0.82
LMNA-211ENST00000470199 BACH1O14867 736 aa20.17■□□□□ 0.82
LMNA-211ENST00000470199 TREHO43280 583 aa20.17■□□□□ 0.82
LMNA-211ENST00000470199 HOXC8P31273 242 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms