RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 COL6A1P12109 1028 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 GGNQ86UU5 652 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 SH3RF2Q8TEC5 729 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 PTPRN2Q92932 1015 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 EXOC2Q96KP1 924 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 FTSJ1Q9UET6 329 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
COL11A1-208ENST00000470170 AQP7O14520 342 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 EPHA5P54756 1037 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 SUMO1P63165 101 aaKnown RBP8.27□□□□□ -1.09
COL11A1-208ENST00000470170 SERINC3Q13530 473 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 SKIDA1Q1XH10 827 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 CD276Q5ZPR3 534 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 MAMDC2Q7Z304 686 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-208ENST00000470170 IPO9Q96P70 1041 aaKnown RBP8.27□□□□□ -1.09
COL11A1-208ENST00000470170 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-208ENST00000470170 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 PCDHA8Q9Y5H6 950 aa8.27□□□□□ -1.09
COL11A1-208ENST00000470170 ACOT7O00154 380 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 MAGEA10P43363 369 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-208ENST00000470170 GLRBP48167 497 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 PAK1Q13153 545 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 RASA3Q14644 834 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 DBX2Q6ZNG2 339 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 LIMS2Q7Z4I7 341 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-208ENST00000470170 ZFP69BQ9UJL9 534 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 KDM2BQ8NHM5 1336 aa8.26□□□□□ -1.09
COL11A1-208ENST00000470170 FAM221BA6H8Z2 402 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 LAMTOR5O43504 91 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 PFKPQ01813 784 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 PKN3Q6P5Z2 889 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 KBTBD2Q8IY47 623 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 SSBP3Q9BWW4 388 aaPredicted RBP8.25□□□□□ -1.09
COL11A1-208ENST00000470170 ZDHHC9Q9Y397 364 aa8.25□□□□□ -1.09
COL11A1-208ENST00000470170 FBXO21O94952 628 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 ENO2P09104 434 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-208ENST00000470170 GUCY1A3Q02108 690 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 NFATC3Q12968 1075 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 SMAD2Q15796 467 aaKnown RBP8.24□□□□□ -1.09
COL11A1-208ENST00000470170 PLEKHH3Q7Z736 793 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 KLHL36Q8N4N3 616 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 STPG3Q8N7X2 389 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 IGDCC4Q8TDY8 1250 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 SNTG2Q9NY99 539 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 ARHGAP20Q9P2F6 1191 aa8.24□□□□□ -1.09
COL11A1-208ENST00000470170 MRPS23Q9Y3D9 190 aaKnown RBP8.24□□□□□ -1.09
COL11A1-208ENST00000470170 ZNF839A8K0R7 811 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 KLHL18O94889 574 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 SRGAP2CP0DJJ0 459 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 PYGMP11217 842 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 ADAM17P78536 824 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 SURF1Q15526 300 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 GLB1LQ6UWU2 654 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 ARHGAP36Q6ZRI8 547 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 FBXW5Q969U6 566 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 C8orf49Q96NF6 230 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 SAMD11Q96NU1 681 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 DHRS4Q9BTZ2 278 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
COL11A1-208ENST00000470170 CATSPERZQ9NTU4 200 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 PPP4R1LQ9P1A2 415 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 SRPK3Q9UPE1 567 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 PCDHA9Q9Y5H5 950 aa8.23□□□□□ -1.09
COL11A1-208ENST00000470170 ARVCFO00192 962 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 WNT9AO14904 365 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 B4GALT4O60513 344 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 KNG1P01042 644 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 INSRRP14616 1297 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 PDE6AP16499 860 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 KRT15P19012 456 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 GABREP78334 506 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 RBL2Q08999 1139 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 GPR19Q15760 415 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 BTBD8Q5XKL5 378 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
COL11A1-208ENST00000470170 ARMC5Q96C12 935 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 SLC39A2Q9NP94 309 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 KCND1Q9NSA2 647 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 CBLCQ9ULV8 474 aa8.22□□□□□ -1.09
COL11A1-208ENST00000470170 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-208ENST00000470170 FAM90A27PA6NNH2 459 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 MAN2B1O00754 1011 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 IL18BPO95998 194 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 AMY2AP04746 511 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 PTPN1P18031 435 aaKnown RBP8.21□□□□□ -1.1
COL11A1-208ENST00000470170 AMY2BP19961 511 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 ZXDCQ2QGD7 858 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-208ENST00000470170 OSTM1Q86WC4 334 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 BORCS6Q96GS4 357 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 GPR20Q99678 358 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.1
COL11A1-208ENST00000470170 RIC8BQ9NVN3 520 aa8.21□□□□□ -1.1
COL11A1-208ENST00000470170 ST6GALNAC2Q9UJ37 374 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms