RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TRAF3IP3Q9Y228 551 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 SIPA1L1O43166 1804 aa15.04■□□□□ -0
BRCA1-209ENST00000470026 ATP8B3O60423 1300 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 CES2O00748 559 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 BUB1O43683 1085 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 MED24O75448 989 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 ERCC3P19447 782 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 KLRC1P26715 233 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 SLC7A5Q01650 507 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 AP3B2Q13367 1082 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 HERC4Q5GLZ8 1057 aaPredicted RBP15.03■□□□□ -0
BRCA1-209ENST00000470026 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 EPM2AIP1Q7L775 607 aaPredicted RBP15.03■□□□□ -0
BRCA1-209ENST00000470026 SLFN12Q8IYM2 578 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
BRCA1-209ENST00000470026 TRERF1Q96PN7 1200 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 ANO3Q9BYT9 981 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 DHX36Q9H2U1 1008 aaKnown RBP15.03■□□□□ -0
BRCA1-209ENST00000470026 PLCB1Q9NQ66 1216 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
BRCA1-209ENST00000470026 A0A087X0T9 212 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 GOLGA6CA6NDK9 693 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 TBX3O15119 743 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 MARCH6O60337 910 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 PALMO75781 387 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 FAM228BP0C875 321 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 GOLGA6DP0CG33 693 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 DDR1Q08345 913 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 QRICH1Q2TAL8 776 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 C8orf74Q6P047 294 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 KCTD1Q719H9 257 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 NELFCDQ8IXH7 590 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 TSEN2Q8NCE0 465 aaKnown RBP15.02■□□□□ -0
BRCA1-209ENST00000470026 ETNPPLQ8TBG4 499 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 TBC1D5Q92609 795 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 PSMB7Q99436 277 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 GOLGA6AQ9NYA3 693 aa15.02■□□□□ -0
BRCA1-209ENST00000470026 NPHP3-ACAD11A0A0J9YXS1 232 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 POLRMTO00411 1230 aaKnown RBP15.02□□□□□ -0.01
BRCA1-209ENST00000470026 MEIS2O14770 477 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 OPA1O60313 960 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 PPFIA1Q13136 1202 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 ADAM9Q13443 819 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 C10orf76Q5T2E6 689 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 MCTP2Q6DN12 878 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 APOBEC3HQ6NTF7 200 aaKnown RBP15.02□□□□□ -0.01
BRCA1-209ENST00000470026 GBP6Q6ZN66 633 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 FRMD5Q7Z6J6 570 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 GPIHBP1Q8IV16 184 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 MREGQ8N565 214 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 DCAF4Q8WV16 495 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 TBC1D7Q9P0N9 293 aa15.02□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L17D6RBQ6 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L19D6RCP7 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L20D6RJB6 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 PPEF1O14829 653 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-209ENST00000470026 CETN3O15182 167 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 SSBP05455 408 aaKnown RBP eCLIP15.01□□□□□ -0.01
BRCA1-209ENST00000470026 HLA-DOAP06340 250 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L24Q0WX57 530 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 KCNH2Q12809 1159 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 GIT2Q14161 759 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 Q4G0T1 1027 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP17L6PQ6QN14 398 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 MS4A14Q96JA4 679 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 NYAP2Q9P242 653 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 TMEM59LQ9UK28 342 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 NENFQ9UMX5 172 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 ANKRD31Q8N7Z5 1873 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 TOM1O60784 492 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 GLI1P08151 1106 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 MYBP10242 640 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 MATR3P43243 847 aaKnown RBP eCLIP15.01□□□□□ -0.01
BRCA1-209ENST00000470026 MMP14P50281 582 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 SKOR1P84550 965 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 APBA1Q02410 837 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 KLHL30Q0D2K2 578 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 ASIC2Q16515 512 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 BMT2Q1RMZ1 405 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 IRF2BP2Q7Z5L9 587 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 IFT20Q8IY31 132 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 SYT2Q8N9I0 419 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-209ENST00000470026 RASSF4Q9H2L5 321 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 USP21Q9UK80 565 aa15.01□□□□□ -0.01
BRCA1-209ENST00000470026 TRIM66O15016 1216 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 SPATA31C1P0DKV0 1188 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 ANXA13P27216 316 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 RPA1P27694 616 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 HOXD13P35453 343 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 IRAK1P51617 712 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 CASP5P51878 434 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 CATSPER3Q86XQ3 398 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 IQCKQ8N0W5 287 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms