RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
SPTLC1-204ENST00000469778 CENPFP49454 3210 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 IGKV6D-21A0A0A0MT36 114 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 LGR5O75473 907 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 BRD1O95696 1058 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 OR52Z1P0C646 297 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 PTGDRQ13258 359 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 ZNF174Q15697 407 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 TMEM266Q2M3C6 531 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 B3GNT9Q6UX72 402 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 ABHD15Q6UXT9 468 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 AFAP1L1Q8TED9 768 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 PAWRQ96IZ0 340 aaKnown RBP14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 HTATIP2Q9BUP3 242 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
SPTLC1-204ENST00000469778 MROH7Q68CQ1 1323 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 EMSYQ7Z589 1322 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 A0A1W2PQ45 241 aaPredicted RBP14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 GSTTP1A0A1W2PQM5 241 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 A0A1W2PQY0 241 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 H3BRB1 525 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 F13A1P00488 732 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 F2P00734 622 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 MYL3P08590 195 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 TCF7P36402 384 aaPredicted RBP14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 RGS19P49795 217 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 STAT5BP51692 787 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 BEX3Q00994 111 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 CXCL17Q6UXB2 119 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 DTHD1Q6ZMT9 781 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 FERMT3Q86UX7 667 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 SESTD1Q86VW0 696 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 KCTD17Q8N5Z5 321 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 C4orf32Q8N8J7 132 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 NEK9Q8TD19 979 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 VTI1AQ96AJ9 217 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 C16orf70Q9BSU1 422 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 SENP6Q9GZR1 1112 aaPredicted RBP14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 STARD7Q9NQZ5 370 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 DISC1Q9NRI5 854 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 PCDHB6Q9Y5E3 794 aa14.23□□□□□ -0.13
SPTLC1-204ENST00000469778 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 MYADML2A6NDP7 307 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 SLC26A4O43511 780 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 CCNE2O96020 404 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 LGALS2P05162 132 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 SUPT20HL2P0C7V6 817 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 GNAT1P11488 350 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 DDIT3P35638 169 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 TXKP42681 527 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 SOX10P56693 466 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 ATP2C1P98194 919 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 SNX17Q15036 470 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 EPHA7Q15375 998 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 SLC43A3Q8NBI5 491 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 GLG1Q92896 1179 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 FERMT2Q96AC1 680 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 TOX2Q96NM4 488 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 BCAS3Q9H6U6 928 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 VAV3Q9UKW4 847 aa14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 MAFBQ9Y5Q3 323 aaPredicted RBP14.22□□□□□ -0.13
SPTLC1-204ENST00000469778 ARVCFO00192 962 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 HAS3O00219 553 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 RPLP2P05387 115 aaKnown RBP14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 MUTP22033 750 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 CDK7P50613 346 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 ITGA7Q13683 1181 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 ERMNQ8TAM6 284 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 FAM167AQ96KS9 214 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 AK8Q96MA6 479 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.13
SPTLC1-204ENST00000469778 BACH1O14867 736 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 XRCC6P12956 609 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 PSEN2P49810 448 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 SP4Q02446 784 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 SPIRE1Q08AE8 756 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 MFSD10Q14728 455 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 SLC39A14Q15043 492 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 SF3A1Q15459 793 aaKnown RBP14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 SWSAP1Q6NVH7 229 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 KAT2BQ92831 832 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms